Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0300 ATGTTTCCTTCAAAACAACGAGGCAACAATGAGAGGGTCATCGAATTTTCTAGCCGTCCCCACCACCACCGCCAGAAAATCTCAGAGGATCTCATTCTGGACGCCGGCCATGCTCATTATCATCATGCATCTCTGGACATCATCAATTTCTCCGATAAAAAATTACAAAGTAATAGTACCAACAAGCTACTTTGTGAATCTACAGTAGCTAGTGATAAGATTAACCATTATCGAAATTCTGATAAAAAGGACTACAAGAAGAAGAACGAGAAACTCATTCACAGAGAAATCGAGAGGCAAAGAAGGCAAGAAATGGCTACTCTCTATGCTTCCCTTAGATCTCTTCTTCCACTAGAGTTCATCAAGGGAAAGCGTTCGATGTCAGATCACATGAATGAAGCAAAGATCTACATAAAGCACCTACAAAAGAGAATCAAAGAACTGAGCGCTAAGAGAGATGAACTGAAGAAACTAGCAGAGACTAATTCTTTGAATCCAGAAGAAACACACGAGTCCGAAAAGTACACATATAGTGGCTTTTTCAGTGTTCATGAGATTAATGACAATGTTGGTGTTGGAATAGAAGTTTCTTGTTCCTTAGGAGAGGAAAAGTTGTTTCCCCTTTCAAAATTACTTAAATTGATGCTTGAAGAAGGACTTGGAGTTGTTAATTGTGTCACCAGCCAAATCAATGGAAGATTAATTCACAGTGTTCAGTGTGAGGTTATTAACAGTTCCGACGATCATGTAGACCTACCCGCGCTGAGAAGGAAAATTGTCAATCTGGTCCCATCATTTAAATGTTCTGATTAA 813 0.3924 MFPSKQRGNNERVIEFSSRPHHHRQKISEDLILDAGHAHYHHASLDIINFSDKKLQSNSTNKLLCESTVASDKINHYRNSDKKDYKKKNEKLIHREIERQRRQEMATLYASLRSLLPLEFIKGKRSMSDHMNEAKIYIKHLQKRIKELSAKRDELKKLAETNSLNPEETHESEKYTYSGFFSVHEINDNVGVGIEVSCSLGEEKLFPLSKLLKLMLEEGLGVVNCVTSQINGRLIHSVQCEVINSSDDHVDLPALRRKIVNLVPSFKCSD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0300 270 Pfam Helix-loop-helix DNA-binding domain 93 142 IPR011598 GO:0046983
Acco01g0300 270 Gene3D - 79 172 IPR036638 GO:0046983
Acco01g0300 270 MobiDBLite consensus disorder prediction 1 22 - -
Acco01g0300 270 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 75 262 - -
Acco01g0300 270 SMART finulus 95 147 IPR011598 GO:0046983
Acco01g0300 270 FunFam Transcription factor bHLH126 81 169 - -
Acco01g0300 270 CDD bHLH_AtORG2_like 92 158 - -
Acco01g0300 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 141 IPR011598 GO:0046983
Acco01g0300 270 Coils Coil 131 158 - -
Acco01g0300 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 157 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0300 Acco-ChrAcco01 3437627 3438919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0300 90 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 42.045 3.28e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g0300 HLH 5.7e-08 No_clan