Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0299 ATGCCATCCCGGCGGCGCCACTCTTCAACGACGCTTTCTGAAGTGGTTGCGATCGACCCATATCCACCAACTTGTTCCCTCTTTTTTCTCGCGTCCCTCTGTTTTCGCCGGCGCACCCGAAAACGCACCACCCCTTCTTCCGATTCCGAGTCAAAGCCTCCCAAACGCTTCTCCTACTCCTCCCTCCGTCACGCCACCGCCTCCTTCTCCACCCGCATCGGAAACGGAGGCTTCGGACCTGTCTTCTCCGGTGTGCTGCCTATGACCCGAAAGCCCATCGCCGTCAAGCTCATGGACTCTGCCTCTTTCCAAGGCGAGCGTGAGTTTCACAACGAGCTTTTCTTCGGCTCCAAGCTTTGTTCCCAACACATCGTCGTCGCGATTGGCTTCGCCTCCGATAGGAACCGCCGGAGATTCTTGCTGGTGTACGATCTAATGCCCAGCGGAAGTCTTCAAGATGCTCTGTTACGACGGAAGAGCCCTCAACTAATGGATTGGAAGAAACGTTTCGCCATAATTATCGATATAGCTAAAGGAATCCGTTACCTTCATTCTTGCGACCCACCTGTGATTCACGGAGATATCAAGCCGAGTAATATTCTACTGGACGCTTCTTTCTCAGCGAAAATTGCCGACTTCGGTCTCGCTCAGTTGAAATCGGAATCCCATTATTTTGATATTTTCAGTGGAATCGATTATTCTGGGTCAGTGGTTGAGGAAACAGAGAGCGTAATTGGTTTTGAGGAGAAAACAGAATCCATGTCAGAAACATCGCCGGAAAATCGGGACAGGGGTAAGAAGAACGTTGGAAGGTTGAAGAGCAGATCAATGAAGGATTGTTGGAGGAAGGAAGACGATGAAAGTAATAAGAACAAGAAGGAAAAGAATAACAAGAAAAAGGGATTTTACAGTGATGAAGAAGCATTTGACAGAAAGATCAAGAAGAAGGGTACAAGGAGTATCGATTGGTGGTTTGACGGAATTAGCAGGAACAGCCATGATTCTTTAAGCGGAGAAATTCAAATTCCGAAGAGTGGTGGAATCAGTAGTACTCCAAGTCTGAAAGGAACAGTTTGTTACGTAGCTCCAGAGTACAGCCATGGCGGCGGAGAAATAACAGAGAAATGCGATGTGTACAGTTTTGGGGTTCTATTGCTTGTGATAGTTTCAGGAAAACGTCCGATTGAGGTGGAGATGGGTTCGCCATTTCCAGAGATTCAGAGAGGGAATCTAATTTACTGGGCACGCCATTGCGCTCGAAATGGGAAGCTTCTAGAACTGGTGGATCAGAGTATGTGCCTGAAGTTGTCGGAGAAAGAGGAGGCTCTGCTCTGTATTAAGGTGGCTCTGCTCTGTCTTGCAAAGTCACCATCTCCTCGTCCTTCAATGGAAGAGGTTTTGAGAATTCTCTGCGGTGCGATGGAACCACCGCAGTTGCCGACGGAGTATCTGTCATCGTCATCACCTTCTCCATTTCCCTTCAAGCCTGGGAAAATCGTTCAGTGA 1506 0.4847 MPSRRRHSSTTLSEVVAIDPYPPTCSLFFLASLCFRRRTRKRTTPSSDSESKPPKRFSYSSLRHATASFSTRIGNGGFGPVFSGVLPMTRKPIAVKLMDSASFQGEREFHNELFFGSKLCSQHIVVAIGFASDRNRRRFLLVYDLMPSGSLQDALLRRKSPQLMDWKKRFAIIIDIAKGIRYLHSCDPPVIHGDIKPSNILLDASFSAKIADFGLAQLKSESHYFDIFSGIDYSGSVVEETESVIGFEEKTESMSETSPENRDRGKKNVGRLKSRSMKDCWRKEDDESNKNKKEKNNKKKGFYSDEEAFDRKIKKKGTRSIDWWFDGISRNSHDSLSGEIQIPKSGGISSTPSLKGTVCYVAPEYSHGGGEITEKCDVYSFGVLLLVIVSGKRPIEVEMGSPFPEIQRGNLIYWARHCARNGKLLELVDQSMCLKLSEKEEALLCIKVALLCLAKSPSPRPSMEEVLRILCGAMEPPQLPTEYLSSSSPSPFPFKPGKIVQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0299 501 FunFam Os07g0541700 protein 146 228 - -
Acco01g0299 501 SUPERFAMILY Protein kinase-like (PK-like) 50 490 IPR011009 -
Acco01g0299 501 Pfam Protein kinase domain 70 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0299 501 PANTHER OS07G0586332 PROTEIN 24 247 IPR044576 -
Acco01g0299 501 SMART serkin_6 67 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0299 501 MobiDBLite consensus disorder prediction 481 501 - -
Acco01g0299 501 Gene3D Transferase(Phosphotransferase) domain 1 146 478 - -
Acco01g0299 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Acco01g0299 501 Gene3D Phosphorylase Kinase; domain 1 54 145 - -
Acco01g0299 501 ProSiteProfiles Protein kinase domain profile. 67 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0299 501 MobiDBLite consensus disorder prediction 248 299 - -
Acco01g0299 501 Pfam Protein tyrosine and serine/threonine kinase 352 469 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0299 Acco-ChrAcco01 3431757 3433262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0299 344 470 Receptor kinase-like Gene Family AT3G58690 34.375 6.89e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Acco01g0299 Pkinase 8.5e-25 CL0016