Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0278 ATGAATTTGCAAAAAGTAGCCATAAAGCAAAACCGCCTTTTTCGTTCTTTATATTCTGAATTTGATACGCCACCCTTCGGCATTCACGTCCTTCATCTTCTTTCAAAATTGGCTCATCTCGATATTATTTTATTTTCGCCAAAATCTTCGGTGTTGATTGATTCTTCCCAATCCCAAACCATGGAGGCTCCAACTCTCAGCGGATTACTCAATCGAATCGCCGCCGAATTCCCCTCCCGTCGTGCCATCTCCGCCTCCGGCAAGTTCGATCTCACCTATTCTCGTCTTCAAGAGCTCGTTGAACGCACCGCCTCCCATTTAGTCTCCTCCGGAATCAACGTCGGCGATGTTGTCGCTCTCACCTTCCCCAATACCGTCGAGTACGTCATAATGTTTTTGGCCGTGATTCGTGCACGAGCGACGGCTGCGCCGCTGAATGGAGCTTATACGGCTGAGGAGTTCGAGTTTTACTTGTCTGACTCGGAGTCGAAGCTCTTACTGACGTCTCAAGAAGGAAATGCTGCGGCTCAAGCGGCAGCTTCAAAGCTTAATATCCCTCACGCGACGGCTTCGCTTTCCAAAGCCGATGACGGTGAGGTCAGTCTCTCTCTGACTCAGAACGAGTCAAAATTGGAGTCGGCCGCCGAACTCGTCAACGACCCTTCCGACGTGGCCCTATTCCTCCACACCTCTGGCACGACAAGCCGGCCGAAAGGAGTGCCTCTAACTCAGCACAACTTGGCCTCATCGGTTCAGAACATAAAGTCCGTGTACAGACTCACTGAGTCCGACTCGACGGTGATCGTTCTGCCACTCTTTCACGTCCACGGACTCATCGCGGGATTACTGAGTTCACTCATATCCGGTGCCGCCGTGGCGCTTCCGGCGGCGGGCCGTTTCTCAGCCTCCACGTTTTGGGCGGACATGAAGAATTATAAAGCAACGTGGTATACGGCGGTCCCTACCATACACCAGATCTTACTGGATCGCCACTCGACCAAACCCGAACCACCCCCGAAACTGAGGTTTATTCGCAGTTGCAGCGCGTCGCTCGCACCGATCATATTGGGTCGGATGGAGGAGGCATTCGGAGCCCCGGTTTTGGAGGCATATGCAATGACGGAAGCGTCCCATCAAATGGCATCAAACCCGCTGCCGGACGACGGGCCACACAAGCCCGGGTCGGTGGGGAAACCGGTGGGTCTAGAAATGGCGATACTGAACGAGAAGGGAGAGATCCAGAAAGCTGAAGCGAAAGGAGAGGTGTGTATTAGGGGTCCGAATGTGACAAAAGGGTACAAAAATAACCCGGCGGGCAATAAGACAGCGTTTGAATTCGGATGGTTCCATACGGGTGATATCGGGTTTTTTGATTCAGAAGGGTATTTGCATCTGGTTGGACGAATCAAGGAGCTCATTAATCGCGGAGGGGAGAAGATATCACCCATAGAAGTGGATGCAGTGTTGCTATCTCATCCAGATATTGCTCAGGCGGTTGCTTTTGGAGTCCCAGACGACAAGTATGGTGAAGAGATAAACTGTGCAGTAATAGCAAGGGAAGGATCAGAAATTGACGAGGAAGAGGTGTTAAAGTTTTGCAAGAAGAATCTTGCATCCTTCAAAGTCCCCAAGAAGGTTTTCATCACTGATTCTTTGCCCAAGACTGCCACCGGCAAGATCGTACGCCGTCTTGTTGCTGAACACTTCGTTTCTCAAAAGTGA 1722 0.5116 MNLQKVAIKQNRLFRSLYSEFDTPPFGIHVLHLLSKLAHLDIILFSPKSSVLIDSSQSQTMEAPTLSGLLNRIAAEFPSRRAISASGKFDLTYSRLQELVERTASHLVSSGINVGDVVALTFPNTVEYVIMFLAVIRARATAAPLNGAYTAEEFEFYLSDSESKLLLTSQEGNAAAQAAASKLNIPHATASLSKADDGEVSLSLTQNESKLESAAELVNDPSDVALFLHTSGTTSRPKGVPLTQHNLASSVQNIKSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLISGAAVALPAAGRFSASTFWADMKNYKATWYTAVPTIHQILLDRHSTKPEPPPKLRFIRSCSASLAPIILGRMEEAFGAPVLEAYAMTEASHQMASNPLPDDGPHKPGSVGKPVGLEMAILNEKGEIQKAEAKGEVCIRGPNVTKGYKNNPAGNKTAFEFGWFHTGDIGFFDSEGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAVIAREGSEIDEEEVLKFCKKNLASFKVPKKVFITDSLPKTATGKIVRRLVAEHFVSQK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0278 573 Gene3D - 57 468 IPR042099 -
Acco01g0278 573 SUPERFAMILY Acetyl-CoA synthetase-like 29 571 - -
Acco01g0278 573 Pfam AMP-binding enzyme 72 475 IPR000873 -
Acco01g0278 573 CDD FACL_fum10p_like 78 567 IPR045310 GO:0016874
Acco01g0278 573 FunFam 4-coumarate--CoA ligase 2 471 572 - -
Acco01g0278 573 PANTHER ACYL-COA SYNTHETASE 63 571 - -
Acco01g0278 573 Pfam AMP-binding enzyme C-terminal domain 484 559 IPR025110 -
Acco01g0278 573 Gene3D - 469 571 IPR045851 -
Acco01g0278 573 FunFam Peroxisomal-coenzyme A synthetase 65 468 - -
Acco01g0278 573 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0278 Acco-ChrAcco01 3156558 3162813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0278 65 572 Monolignol Biosynthesis Gene Families AT4G05160 31.309 2.38e-61 210
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0278 01 3156558 3162813 Acco01g0278 01 3156558 3162813 ECH