Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0262 ATGGATTTAGGTCAATTGAAGCAATTCGATCGCTACAAGGCTGACAGTGTAGGACCTAGCCCAGGTCAAAAGCTTCGGGTCGTGGCTAAAGTCAGGGGATTTGCGTTTCCGGAGGTCGAGGCTCAGGGTGGGTCTTTGAGATCGGTGGACTGGATTTCGGTGAACAAGCCTCCAGGAGAGAGTTCAGAGGGAGTCGCAATCTCCTTTAGGGACAATTCTTCCAGTCGTAAAGAGTCTTACTGGGTGGACTATTGTTATGGGGACAGTGAAGAAAATGACATGATCTATTCAAGAGACGTGAAGCCTCTTGTATCTGCAGTTTTTGAAGGCCGCAACAGCTCTATTATTGCATGTGGAGCAAGAAGCAGTGGAAAGACTCATATGATTCAGGGTTCTGCTAAGGTACCTGGTTTGTCAGTGCTTGCTGTCGCTGAGTTTCTTTCACTGGCGGAGCAAAATGGCAAATCTATTGCTATGTCACTGTATGAGGTTGATCATCAGGAGCATGCTATTGATTTATTAAATCCAGAACAACCAGCCATTTCTGTTCTTGAGGACCGAGGCCGTATTCAGTTTAAAGGGCTTTCACAGATTCCTGTAAAATCCATTTCAGAGTTCCAGAAAGCATACTTCAATGCTTGTGCTACTCGAAAAGCAGCCATCAAAAAGGGAAATGACCATGCTCGTAGGACCCATGTGGGATTAACAGTGTATGTCTTTTCTGAGGCTGAAGGCACAGAATCTGGTTCTGGCTCTGTGGGCAAAATGAATTTTGTTGACTTGGCAGGTTATGAAGATGCCAGGAAGAAGAGTTGTGACAACTCTTGTCTAGCTGAAACTAATAAAATTAATAAGTCCATATATGCTTTATTAAATGTCTGTCATACTTTGAGCACCAATGAAAGTCGTGTTCCCTATCGCGAGAGCAAACTTACACGCTTATTACAGGACTCTTTGAGAGGGACTAGCCGAATTTTGATGGTTGTCTGCGTGAACCCATCTTTTTGCCAAAACACTATCTACATGTTAAGCTTAGTATCTCGGTCGTGTCAAGTGATTCATCGAGTGGCAGTAGACGCCACAAAGAAAAGTGAAAGTAGTTCTGCAAGACAGATGGTGCTTACATCTCAGAAGAGCAAGGTGCCCAAGAGTGTGTCTTCTACGGCAAAAAAATTAACTAGCTCCAGATCAAATGTACGTGAGGAGAAAGCTGATGTGATAAAATCTGCAACAAAAGGAAGGAAATTATTTGATGAAGCAAGTCATTCTGCTATAGCTGAGAAGGCAAGGTTGTCAGATACCAGTTCTATGGCAGATACTTTTGTGAAGGAAGAGGAAAAATCCATTGTACCTCTTCCCGAAGCATTATCTTTTATGCAAGAAAAATCCACTGTACCCGTTACCGAAGCATTATTGCCTTTGTCACTGGATGACTCGGTTCTAGACGCTAGGCATAACGCAGAACTCATGGTGGAAAAGGTTGTCCCTGAGAAAATTGTGGATCATCGAGAGGAGCATACTCCTAATTCTGGCAAGTGTAAGAAAGCTTTGTCCCTGGCCTCTATAGTTCAGGAAGGTCACTATATGGATAAGGAAAACGACGGAATCATTGCTAATAAAGATGAGTCACCACCAATTAGTACTCAACTACGTGAACTGTCAAACAATTTGAAGCTTCTCTTATCTTCAACCCCACTAAGCGTGAAGATACCAGAACAGGACTGCGTCATGTCACTTGACAATAATCAGGTGTCTTCTACAGATATTGAGGAACCAAAAACTCCGATCATGGAACAAACTGTGGGTTCTATTGATAAATGGAATGTCTTGAATGCCAAAAGTCCTTGGGAAACATATAATGTCCGCAGTTCTGGAATGAAGAACTCTCTTGTTCAGGAATATCTTAGGGTCTTGAACACTGCTAACAAGGAAGAATTAAAAAGATTAAAGGGGATTGGTGAGAAAAGAGCAACATACATACTTGAGCTTCGTGAAGAATCTCCTGAACCTTTCAAGAGTCTTGAGGATTTACAGGACGTTGGACTTTCAGCAAAGCAGATTAAGAGGATGATGAAAAGGGAAGTTGGAGAACTCTTCAATTAG 2103 0.4251 MDLGQLKQFDRYKADSVGPSPGQKLRVVAKVRGFAFPEVEAQGGSLRSVDWISVNKPPGESSEGVAISFRDNSSSRKESYWVDYCYGDSEENDMIYSRDVKPLVSAVFEGRNSSIIACGARSSGKTHMIQGSAKVPGLSVLAVAEFLSLAEQNGKSIAMSLYEVDHQEHAIDLLNPEQPAISVLEDRGRIQFKGLSQIPVKSISEFQKAYFNACATRKAAIKKGNDHARRTHVGLTVYVFSEAEGTESGSGSVGKMNFVDLAGYEDARKKSCDNSCLAETNKINKSIYALLNVCHTLSTNESRVPYRESKLTRLLQDSLRGTSRILMVVCVNPSFCQNTIYMLSLVSRSCQVIHRVAVDATKKSESSSARQMVLTSQKSKVPKSVSSTAKKLTSSRSNVREEKADVIKSATKGRKLFDEASHSAIAEKARLSDTSSMADTFVKEEEKSIVPLPEALSFMQEKSTVPVTEALLPLSLDDSVLDARHNAELMVEKVVPEKIVDHREEHTPNSGKCKKALSLASIVQEGHYMDKENDGIIANKDESPPISTQLRELSNNLKLLLSSTPLSVKIPEQDCVMSLDNNQVSSTDIEEPKTPIMEQTVGSIDKWNVLNAKSPWETYNVRSSGMKNSLVQEYLRVLNTANKEELKRLKGIGEKRATYILELREESPEPFKSLEDLQDVGLSAKQIKRMMKREVGELFN 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0262 700 Pfam Kinesin motor domain 67 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g0262 700 Gene3D - 625 698 - -
Acco01g0262 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 363 IPR027417 -
Acco01g0262 700 FunFam Kinesin-like protein KIN-10C 624 698 - -
Acco01g0262 700 PRINTS Kinesin heavy chain signature 110 131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g0262 700 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g0262 700 PRINTS Kinesin heavy chain signature 255 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g0262 700 PRINTS Kinesin heavy chain signature 304 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g0262 700 Gene3D Kinesin motor domain 22 399 IPR036961 -
Acco01g0262 700 PANTHER KINESIN-RELATED 71 522 IPR027640 GO:0003777|GO:0007018
Acco01g0262 700 MobiDBLite consensus disorder prediction 367 397 - -
Acco01g0262 700 Pfam Helix-hairpin-helix motif 638 689 - -
Acco01g0262 700 ProSiteProfiles Kinesin motor domain profile. 24 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g0262 700 SMART kinesin_4 22 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g0262 700 MobiDBLite consensus disorder prediction 367 394 - -
Acco01g0262 700 SUPERFAMILY RuvA domain 2-like 629 693 IPR010994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0262 Acco-ChrAcco01 2899203 2904425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0262 24 334 Calmodulin-binding Proteins AT5G65930 30.094 1.03e-30 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0262 01 2899203 2904425 Acco01g0262 01 2899203 2904425 ECH