Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0261 ATGCCAGTTGAAAAACACAAGGTTTTTGGCACCCCAGATGTCATGAAAGCAGAGAATGGAAATGACTTCATAGAAACCGCACTCAGAAAAGCAATTGGTAGAGAACCTTCTCTTTCTTTTGTAAGGGCTAGTGACAGTCCAGTCCAGTGGATACATTTACTTAATATGTTAGAACAGCAAGTGCTCACATATTTGACAGAACTACCAGGCTGGCCTTTGCTCTCTCCTCTGAAGGTTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTATAGAAGACATATGCGTGCTCACCATCGGTTGAAAAAGACTGATAAGGATTCAACAAAAAATAGAGATCTGTTAGGAGCATATTGGGATAAGCTATCTGTAGAAGAGGCAAGAGAAGTTGTATCATTCAAGAATGTAATGCTAGAGGAAGTTTCGGGGTCTTCTATTTTAAAAGCGCTGGCAAATCTTGTCCGGAAACAAGGGTTTTCTTCGCTTCCACAGAATTATCTGAAGGCTGGTTCTGCACTTTTGGATATTGTTCAAGCTAGATCCTCCCTTCTTTCCTTATCTTCCAAGGAGTTTTTCAGTATCCTCGATAGTGCCAGTGAAAAAACATTTTTATGTGCGGCAGCAGTGTCAATGCAAAAATATATTTTTGATGGAGAACCGGGGAAGATTGGGCTTGAATCAAAAAACCTAGTTGCTTGTGCTAGTTTCCTGCTAGAACAAAAATTGGTTAAGGCATGTCTTGCTGACAAGGAAGCTGAAGCATTAAGATGCGAGAAGCTGCTAGTGGAGGAGGAGGAAGCTGCTCAGAAAAGACAAGCTGATATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGGCAAAAAGAACAAAAGGCAAGGGGGCAAAAGCTTGAGGATGAGGCAGAAATGAAAAAGAATGGCAGCAGCACAGCAGCTGACAGTTCATTGGCAGAAGCATTTCCAGATACACGTGACTCTGGAGAACATAGTCCAGATACATTGGCAGTCCATGGTCCTGTACTACCTGTGCCCTTCCATTGCACAGATACTAATGAAGGTGCAGACAGGGATTCTCCGTCAGTGTATGATTGTGGCGCTGATGAGAACATCGAGCTAGAGACATCCCAAGGACATGTTTGTCAACACGTTGTGGTTGCTCAACCAAAATCACTATGGGCTGTAGCTAATGGTTTTAATGCAAATCATAACTCTAAATTTTCCAAGCCTGGAGTCATTCAGAAGTATGAGAGCCACCACAATCAAAAGGCCGCTCCCATGCTTAATGGTAACAAAGTATGGAGCCGAAAGCATAAGCAAAAAATTATTGAGGTACATTCAAAAGCCAGACTAGAGAAAGAAGCAGATGAGGGTAAAAACCACAAAGTTTTAATAGGGTCTATATCTGTTACTCTTGGAAAATGCAGCCAATCAGAGGATAATGTGGTGGAATCTGGAGAGGGCTGCTTGGTGGCAAATTCAACCAAGCATCGGGAGAAGCCTGTCAAACCTGATTCTGCACAGATTGGTGACAATCAGTTGTTAGTTAAGGCTGTTAAGCTTTGGAGGCCAGTTACTCATGGAACTAGATATTCATTACCACTTCCCAGTGCTGGTCCAGAAGCTGATGCAATAGATGGAAAAAAAGATGATCAAAATTTGTCTGATCTAAATTCTTTAAGGCCGTGTGACTTAGGTAATAGTGATAGTAGTTTTGGGAATAATTCCTCCCATCTAGAGGGCCAAGTGGGTCCAAGAAACTTGCAGCTTTCTAGTCAAGCTGCCAAAGCCTTTCTTGCAGAAAGATGGAAAAAAGCTATATCGTCAAGCCATGTGAAATTGGTTCTTTCACCTGACTCTGCACCTCCTAGGTGCCTGGAGGCACAAGATTGTGAACTAGATGCATGTCAATCTTCAAATATTGACGAATGCTGCAATTTTGCAAGTGCAGGGACTCGGCTGCCTGCAACCTCGTCTAAATCCAAAATCACAATGAAGCCCGAAAAGGGTGTCAAGATAAAGTACATTCCCAAACAAAGAACAGCTACTTAA 2064 0.423 MPVEKHKVFGTPDVMKAENGNDFIETALRKAIGREPSLSFVRASDSPVQWIHLLNMLEQQVLTYLTELPGWPLLSPLKVQLQKCEKCSREFCSSINYRRHMRAHHRLKKTDKDSTKNRDLLGAYWDKLSVEEAREVVSFKNVMLEEVSGSSILKALANLVRKQGFSSLPQNYLKAGSALLDIVQARSSLLSLSSKEFFSILDSASEKTFLCAAAVSMQKYIFDGEPGKIGLESKNLVACASFLLEQKLVKACLADKEAEALRCEKLLVEEEEAAQKRQADILERKRQKKLRQKEQKARGQKLEDEAEMKKNGSSTAADSSLAEAFPDTRDSGEHSPDTLAVHGPVLPVPFHCTDTNEGADRDSPSVYDCGADENIELETSQGHVCQHVVVAQPKSLWAVANGFNANHNSKFSKPGVIQKYESHHNQKAAPMLNGNKVWSRKHKQKIIEVHSKARLEKEADEGKNHKVLIGSISVTLGKCSQSEDNVVESGEGCLVANSTKHREKPVKPDSAQIGDNQLLVKAVKLWRPVTHGTRYSLPLPSAGPEADAIDGKKDDQNLSDLNSLRPCDLGNSDSSFGNNSSHLEGQVGPRNLQLSSQAAKAFLAERWKKAISSSHVKLVLSPDSAPPRCLEAQDCELDACQSSNIDECCNFASAGTRLPATSSKSKITMKPEKGVKIKYIPKQRTAT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0261 687 MobiDBLite consensus disorder prediction 296 311 - -
Acco01g0261 687 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 686 - -
Acco01g0261 687 Coils Coil 253 273 - -
Acco01g0261 687 ProSitePatterns Zinc finger C2H2 type domain signature. 84 105 IPR013087 -
Acco01g0261 687 MobiDBLite consensus disorder prediction 285 337 - -
Acco01g0261 687 MobiDBLite consensus disorder prediction 534 557 - -
Acco01g0261 687 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0261 18 684 C2H2 Transcription Factor Family AT4G25610 40.387 3.43e-136 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco01g0261 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0261 01 2889013 2893199 Acco01g0261 01 2889013 2893199 ECH