Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0258 ATGACCAGTCCTGGCCCTAGCTCTAGGATTCAAAGTGGAGCTGTCACACCCATTCATCCTAGAGCTGGGGTAACACCCACTGAATCACAGACTGGATGGGTTGATGAAGGGAAAGAACAGAGTCATCGTCTACCACTTCCACCCCTGACAGTTTGCTCCCGATGGAAAAAGGGGAAGCTGCTGGGAAGAGGCACATTTGGACATGTTTATGTTGGCTTCAATAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACATTGTTTTCAGACGATGCCAAGTCCAAGGAAAGTGCCAAGCAATTAATGCAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTGGAATATGTATCTGGTGGATCCATATATAAACTTCTTCCAGAATATGGGCATTTTGGTGAACTAGCTATCCGTAACTATACCCAACAAATTTTGTCGGGGCTTGCTTATTTACATGCTAAAAATACTGGCCACAGGGACATCAAGGGAGCAAATATACTTGTAGATCAAAATGGCCGGGTAATCAAGTTGGCAGACTTTGGTATGGCAAAACATATAACGGGGCAGTCATGTCCTTTATCATTCAAGGGAAGTCCTTATTGGATGGCTCCCGAGGTCATAAAGAACTCCAGTGGTGCCAACCTTGCTGTGGATATATGGAGTCTTGGTTGCACAGTTTTGGAGATGGCTACAACTAAGCCTCCTTGGAGTCAATATGAAGGGGTTGCTGCCATGTTTAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGAAAACCTATCAAATGAAGGAAAGGATTTTGTTCGGAAATGTCTGCAACGTAATCCACATGATCGTCCTTCGGCTCAGAAACTATTGGAACACCCTTTTGTAAAATGTGCTGCACCTTTGGAAAGACCTATTCTGGGAGCTGAAGCGTCAGATCAGGGCTCTGGAACTGCCATGGAGCAAAATCTCTGATTCTATGGGCCTTGTTTGGGATCTCGCAGAGTTTTGAACGACTCAGGAACGTTCCTACTCGGATTTGAGCTAAAAATTTTCAGTGGGTTTCAGTTCAGATTCACACCGTTGAGTGTTGAGAGCCTAGTGTTTCATTCAAAGACAAATATGCCTTCATGGTGGGGGAAATCATCGTCAAAAGAAACCAAGAAGAAAGGAGGTAGAGAAAGTATCATTGATGCAATACAAAGAAAATTTAAAATCCCGTCTGAAGGAAAGGTAAGCGGTAGGTCTCGAGGACCTCAGAAAAACTGCAATGATACTATTTCAGAGAAGGGGGCTCAGTCTCCAGTTGAATCAAGGTCTCCTTCACCATCCAAAGTAGCACGGTGTCAAAGTTTTGCTGAAAGGTCTCTTCCCCAGCCACTGCCACTTCCTGTAGGGCATCCTTCATGTATAGGACGAACAGAGTCTGAAATTAGCATATCATCGAAGTCAAGAGGGGAGAGGGTTTCTAAGAAATCATTGTATTTGCCACTCCCAAGACCTGCATGCATTCGTAGTAGGCCAAACCCTGCAGATTTAGATGGAGACCCTATCACTGCCTCTGTATGTAGTGAAAGCTCTGCTGATAGTGATGATCCAGCAGACTCTTGTCTACGCAGTCCACTGGCAACTGACTTGGAGACTGGGACTAGAACTGCTGCTGGCAGCCCTTCCAGTTCAATGCTCAAGGAGCAATCATCTCCTGGTTTTCAACTGAGTTCAAGAGAGGTCAAAAAGCCAGCAAACATCCTGAGTAATCATATATCTCCTACATCCCCAAAACGGAGACCTTTAAGCAATCACGTGCCAAATCTGCAGGTTCCTCCTCATGGTGCTTTCTTTAGTGCTCCTGACAGCTCCAAGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGAACAAGTGCTGAGCTCTGCTTTTTGGTCTGGAAAGCAATATTCAGAGGTCAATTTTATTGGATCTGGGCACTGCTCCAGTCCAGGTTCTGGTCAAAACTCTGGACATAATTCAATGGGAGGGGACATGACAGGACAGATATTTTGGCAACCAAGTAGGGGTAGCCCTGAGTATTCTCCTGGTGTTAGCCCCAGAATGACCAGTCCTGGCCCTAGCTCTAGGATTCAAAGTGGAGCTGTCACACCCATTCATCCTAGAGCTGGGGCAACACCCACTGAATCACAGACTGGATGGGTTGATGAAGGGAAACAACAGAGTCATCGTCTACCTCTTCCACCCCTGACAGTTACCCATTCCTCACCTTTCTCTCATTCAAATTCAGCAGCAACATCTCCATCTGTGCCAAGAAGTCCAGGAAGAGCAGATAATCCTTTGAGCCCTGGCTCCCGATGGAAAAAGGGGAAGCTGCTGGGAAGAGGCACATTTGGACATGTTTATGTTGGCTTCAATAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACATTGTTTTCAGATGATGCCAAGTCCAAGGAAAGTGCCAAGCAATTAATGCAGGAAATTGCTCTATTAAGTCGTTTACGGCATCCCAATATTGTGCAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTGGAGTATGTATCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGGCATTTTGGTGAACTAGCTATCCGTAACTATACCCAACAAATTTTGTCGGGGCTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAGGGAGCAAATATACTTGTAGATCAAAATGGCCGGGTAATCAAGTTGGCAGACTTTGGTATGGCAAAACATATAACGGGGCAGTCATGTCCATTATCATTCAAGGGAAGTCCTTATTGGATGGCTCCCGAGGTCATAAAGAACTCCAGTGGTGCCAACCTTGCTGTGGATATATGGAGTCTTGGTTGCACAGTTTTGGAGATGGCTACAACTAAGCCTCCTTGGAGTCAATATGAAGGGGTTGCTGCCATGTTTAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGAAAACCTATCAAATGAAGGAAAGGATTTTGTTCGGAAATGTCTGCAACGTAATCCACATGATCGTCCTTCGGCCCAGAAACTATTGGAACACCCTTTTGTAAAATGTGCTGCACCTTTGGAAAGACCTATTCTGGGAGCTGAAGCGTCAGATCAGGGCTCTGGTATTGTGCATGGAGCAAAATCTCTGGGCGCTGGGCAAGGCAGAAATCTCTCTGCCCTGGATAATGACAGACTTTCTGTTCATTCTTCTAGGGTGTTGAAAATGAATCCGCATGCGAGTAATGAAGGCCATTTTCCAAGGAATATTTCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGCAGTCAAGATCACCACAGCACATGAATGGGAGAATGTCTCCCTCTCCCATATCTAGCCCCCGTACGGTTTCTGGTGCATCCACGCCTCTCACTGGTGGTAGCGGTGCCATTCCATTTGGCAATCACCTGAAACAGTCAGCTTACTATCAAGAGGGTCTTGCAAACTTGCCAAAGCACTCAAATGGTATCTACATTAGTGCCCCTGCTCATCTTGACTCTGGCGTTGACATCTTTCGCAATCTACAAATAGGGTCTCAAACAGAACTGATTCCAAGTGAAAATGATGTTCTGGGGAAGCATTTTGCGAGACCTCCTGTTGAGCCTTACGATGTTCAGTCAGTCTTGGCTGATCGTGTTTCCCGACAGCTATTGGGAGATCATGTTAAGATTAACCCGTCTTTGGATCTTAGTCCCAAGTCTCCTTCGCTCAACCGGTCAAATGGCCAATGA 3822 0.4526 MTSPGPSSRIQSGAVTPIHPRAGVTPTESQTGWVDEGKEQSHRLPLPPLTVCSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQYYGSETVDDKLYIYLEYVSGGSIYKLLPEYGHFGELAIRNYTQQILSGLAYLHAKNTGHRDIKGANILVDQNGRVIKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGANLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPENLSNEGKDFVRKCLQRNPHDRPSAQKLLEHPFVKCAAPLERPILGAEASDQGSGTAMEQNLXFYGPCLGSRRVLNDSGTFLLGFELKIFSGFQFRFTPLSVESLVFHSKTNMPSWWGKSSSKETKKKGGRESIIDAIQRKFKIPSEGKVSGRSRGPQKNCNDTISEKGAQSPVESRSPSPSKVARCQSFAERSLPQPLPLPVGHPSCIGRTESEISISSKSRGERVSKKSLYLPLPRPACIRSRPNPADLDGDPITASVCSESSADSDDPADSCLRSPLATDLETGTRTAAGSPSSSMLKEQSSPGFQLSSREVKKPANILSNHISPTSPKRRPLSNHVPNLQVPPHGAFFSAPDSSKSSPSRSPLRAFGTEQVLSSAFWSGKQYSEVNFIGSGHCSSPGSGQNSGHNSMGGDMTGQIFWQPSRGSPEYSPGVSPRMTSPGPSSRIQSGAVTPIHPRAGATPTESQTGWVDEGKQQSHRLPLPPLTVTHSSPFSHSNSAATSPSVPRSPGRADNPLSPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGHFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDQNGRVIKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGANLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPENLSNEGKDFVRKCLQRNPHDRPSAQKLLEHPFVKCAAPLERPILGAEASDQGSGIVHGAKSLGAGQGRNLSALDNDRLSVHSSRVLKMNPHASNEGHFPRNISCPVSPIGSPLLQSRSPQHMNGRMSPSPISSPRTVSGASTPLTGGSGAIPFGNHLKQSAYYQEGLANLPKHSNGIYISAPAHLDSGVDIFRNLQIGSQTELIPSENDVLGKHFARPPVEPYDVQSVLADRVSRQLLGDHVKINPSLDLSPKSPSLNRSNGQ 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0258 1273 MobiDBLite consensus disorder prediction 656 714 - -
Acco01g0258 1273 SUPERFAMILY Protein kinase-like (PK-like) 52 298 IPR011009 -
Acco01g0258 1273 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 435 1055 - -
Acco01g0258 1273 ProSiteProfiles Protein kinase domain profile. 786 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0258 1273 FunFam Mitogen-activated protein kinase kinase kinase 784 1067 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 501 630 - -
Acco01g0258 1273 FunFam Predicted protein 51 315 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 1119 1155 - -
Acco01g0258 1273 Gene3D Transferase(Phosphotransferase) domain 1 53 319 - -
Acco01g0258 1273 Gene3D Transferase(Phosphotransferase) domain 1 784 1060 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 1259 1273 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 1 41 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 544 600 - -
Acco01g0258 1273 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Acco01g0258 1273 SUPERFAMILY Protein kinase-like (PK-like) 784 1151 IPR011009 -
Acco01g0258 1273 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Acco01g0258 1273 MobiDBLite consensus disorder prediction 416 450 - -
Acco01g0258 1273 SMART serkin_6 786 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0258 1273 SMART serkin_6 55 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0258 1273 MobiDBLite consensus disorder prediction 656 788 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 409 486 - -
Acco01g0258 1273 Pfam Protein kinase domain 56 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0258 1273 Pfam Protein kinase domain 787 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0258 1273 MobiDBLite consensus disorder prediction 1254 1273 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 723 737 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 1119 1161 - -
Acco01g0258 1273 CDD STKc_MEKK1_plant 785 1043 - -
Acco01g0258 1273 MobiDBLite consensus disorder prediction 745 772 - -
Acco01g0258 1273 ProSiteProfiles Protein kinase domain profile. 55 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0258 Acco-ChrAcco01 2861007 2874299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0258 1 374 MAP Kinase Kinase Kinase AT1G63700 63.426 3.57e-163 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco01g0258 Pkinase 4.9e-73 CL0016