Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0241 ATGCTCCAAAACTTTCCTTCCATGGCGCCTCCTCAAATGCTTGTTCTACCTTTAATTCTTCTTGTTTCCATTGTTCCTTCATCGTTTTCTTTCACTCCTGTGGATAATTATCTTCTCAACTGTGGATCAAATGCAAATGCATCAGTCTTCAACCGAATCTTCACGGGCGATTCCACGAAACCCGGTTCGGTTTTTCTTGCCGCGGGTAAATCTATTACGCTTGCGAACCAAAATTCGCCTTCGAATTCTCCTACTCTGTATCAGACAGCCAGAGTTTTCACGAGCACGGGGAGCTACAGGTTTCATATGAAGAGTAATGGTACTCATTTGGTACGTTTTCATTTCTCGCCCTTTTCAGCTCAAGGTTTTGATTTAAAATCGGCCAAGTTTAGTGTTCTGGTTGGTGGAAATACGCTTCTGAAAGAGTTTCAGTTGCGTAATGGCACTTTGATTAAGGAGTATATATTGAAGATTGAATCAAATCTGCTCGAAATAGAGTTTGAACCTGTGGGTGGTGCGGGTTTTGGGTTTGTCAATGCTTTGGAGGTATTTACAGCCCCCGTGGATTTCATTCTTGATTATGGAGCTAGGTTTGTGGATTCTTCTGGATTTGAAGAGTACAGGAATCTTTCATCTCAGGTTTTAGAGACAGTTTATAGAATTAATGTTGGTGGCTCGAAAATAACTCCTTTCAATGACACGCTCTGGAGGACTTGGATTCCTGATGATGATTATTTGGTGTTTAAGGAAACAGCTAAGCGTGTGGCTAGCACTCATACACCGAATTATCAGAAGGGAGGTGCAACCCCAGAGATCGCCCCTGATAATGTTTATATGACTGCCCAGGAGATGAATCGAGAAAACTCAAGCCTGGCTTCCAGGTTCAACCTAACTTGGAAATTTCAGGTGGCTCCGGCCGCCGGTGGGGGTGGTGGTGGTGGTATCCGGCACTTAGTTCGGTTGCATTTCTGTGATATTGTTAGCTCTGCATTGAACTTGCTGTACTTTGATGTGTATCTTAATGGCTACTCTGCATACAAGGATTTTGATCTGTCATCTCTTACTTTCCATGTTCTTGCATCCCCATTCTATATGGATTTTGTTGTAGATTCTGATGATTCAGGTTCTATTGAAATAAGTGTTGGTCCTTCTGATCTGTCCGGTGTGATGAGGATGAATGCCTTGTTGAATGGCGCAGAGATCATGAAGATGGTCAATGTTATGGATTCGCATGTTGTTCATAAAAGAAAAATATTATGGATATTGGTGGGCTCAATTGTTGGAGGAGTTGTACTACTTTTGGTAGTGGTTGGTCTTCTTGCTTTTATGTTCAGGAAGAGGAAACCTAAACAAAAGACAGCAGAAAGTGTAGGCTGGACACCTTTAAGAATGTTTGGAGGGAGCTCACTCAGTCGATTGTCTGAAGCTCTTGCATCTCCAGGATCTCATGGATATTTAGGCTTGAAAGTCCCTTTTGCAGATGTACAGGCAGCAACAAACAATTTTGATAGAAATCTGATCATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGCGACGCTCAAAGAAAACGTGAAGGTTGCGGTCAAGAGAGGAATGCCCGGGTCCAGGCAGGGACTTCCAGAGTTCCAGACTGAAATTGCAATTCTATCCAAAATTCGCCATCGCCATCTCGTTTCTCTTGTTGGTTTTTGCGAGGAAAATTCAGAAATGATACTTGTCTATGAGTATGTTGAAAAGGGCCCACTTAAAAAGCATTTGTATGGTTCAGAACTACCTCCTTTGTCTTGGAAGCAGCGTCTCGAGATATGCATTGGGGCAGCTAGAGGTCTTCACTATCTTCACACTGGTTTTGCACAAGGAATCATCCACCGTGACATTAAATCGACCAACATATTGCTTGATGAAAATTATGTGGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGTCCATGTCTCGATGAAACCCATGTGAGTACTGGTGTGAAAGGCAGTTTTGGTTATCTGGATCCTGAGTATTTCCGGAGGCAGCAACTTACAGATAAATCGGATGTCTATTCGTTCGGGGTTGTTCTTTTCGAGGTTCTTTGTGCTAGACCTGCTGTTGATCCGCAACTTGCTAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGAAGAAGGGTATGCTGGAGCATATAGTCGATCCCCATATTGTCGGGCAGATCAAACACGAATCCTTGAAGAAATTTGGTGAAACAGCTGAGAAATGTTTGGCTGACTATGGTGTTGACCGGCCAACTATGGGTGATGTGTTATGGAATTTGGAATATGTACTTCAGATCCAAGAAAGTGGTCAACTAAGGGAAGCAACAGCCAACTTGACAACCACTGTTGTTACTGGAACTCCTTCTTTCAACATAAGAACACAGGGATATCATGATAATTGTAATTCCGACATAAGTACAAGTGAAGTTTTTTCCCAACTAATGAACAATGAAGGCAGATAG 2499 0.427 MLQNFPSMAPPQMLVLPLILLVSIVPSSFSFTPVDNYLLNCGSNANASVFNRIFTGDSTKPGSVFLAAGKSITLANQNSPSNSPTLYQTARVFTSTGSYRFHMKSNGTHLVRFHFSPFSAQGFDLKSAKFSVLVGGNTLLKEFQLRNGTLIKEYILKIESNLLEIEFEPVGGAGFGFVNALEVFTAPVDFILDYGARFVDSSGFEEYRNLSSQVLETVYRINVGGSKITPFNDTLWRTWIPDDDYLVFKETAKRVASTHTPNYQKGGATPEIAPDNVYMTAQEMNRENSSLASRFNLTWKFQVAPAAGGGGGGGIRHLVRLHFCDIVSSALNLLYFDVYLNGYSAYKDFDLSSLTFHVLASPFYMDFVVDSDDSGSIEISVGPSDLSGVMRMNALLNGAEIMKMVNVMDSHVVHKRKILWILVGSIVGGVVLLLVVVGLLAFMFRKRKPKQKTAESVGWTPLRMFGGSSLSRLSEALASPGSHGYLGLKVPFADVQAATNNFDRNLIIGSGGFGMVYKATLKENVKVAVKRGMPGSRQGLPEFQTEIAILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSELPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLAREQVNLAEWALEWQKKGMLEHIVDPHIVGQIKHESLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQESGQLREATANLTTTVVTGTPSFNIRTQGYHDNCNSDISTSEVFSQLMNNEGR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0241 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Acco01g0241 832 Pfam Malectin-like domain 39 404 IPR024788 -
Acco01g0241 832 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Acco01g0241 832 FunFam Receptor-like protein kinase FERONIA 214 406 - -
Acco01g0241 832 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0241 832 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Acco01g0241 832 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0241 832 CDD STKc_IRAK 508 773 - -
Acco01g0241 832 SUPERFAMILY Protein kinase-like (PK-like) 488 773 IPR011009 -
Acco01g0241 832 FunFam Putative receptor-like protein kinase 36 187 - -
Acco01g0241 832 Pfam Protein tyrosine and serine/threonine kinase 507 718 IPR001245 GO:0004672|GO:0006468
Acco01g0241 832 Gene3D Transferase(Phosphotransferase) domain 1 578 796 - -
Acco01g0241 832 Gene3D - 36 189 - -
Acco01g0241 832 Gene3D - 214 406 - -
Acco01g0241 832 PANTHER OS07G0166700 PROTEIN 489 779 IPR045272 GO:0004714|GO:0006468
Acco01g0241 832 FunFam receptor-like protein kinase FERONIA 469 577 - -
Acco01g0241 832 FunFam Receptor-like protein kinase FERONIA 578 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0241 Acco-ChrAcco01 2664494 2666992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0241 31 832 Receptor kinase-like Gene Family AT3G46290 49.456 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco01g0241 Malectin_like 2.1e-32 CL0202