Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0239 ATGGATTCTAATGGTTATGTGGATGATAAAAGTGAAAGTAGATTGTATATTGGGAACCTTGATCTTAGAATAACAGAAGCAGCTCTTATAAAAATGTTTTCTCCTTATGGGAAGATTGTATCAGAGGATTTCTTGTGGCACACTCGAGGTCCCAAGCGTGGAGAGCCACGTGGTTTTGCTTTCATCCAGTATAGCTCAAAAGAGGAAGCAGAATTGGCCAAGGAGAAAATGCACGGCAAGTTAGCTTGTGGCCGGCCACTGGTTGTTCGGCTTGCTAGTGAGAAGTGCATGTTAGAAACAGCCAATAACTCGTGGAAAGTCACTGGAGAAGGGCACAAGATACACCTTGCTGGTAATGGCATGGGACAGACGAGTCGTAGTGCAAAAATAGCTGCAATAAAGAACAAATTGAAATCAATAGAGGAGGAGAGCTCTAGGCCAAAGAAACAGAAGCAAACTGATGATGCATCTGGAAGCAATTGTGTTAGTAAACTTTGTATCACCAGGGATATTATAGATTAA 522 0.4195 MDSNGYVDDKSESRLYIGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAFIQYSSKEEAELAKEKMHGKLACGRPLVVRLASEKCMLETANNSWKVTGEGHKIHLAGNGMGQTSRSAKIAAIKNKLKSIEEESSRPKKQKQTDDASGSNCVSKLCITRDIID 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0239 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 94 IPR000504 GO:0003723
Acco01g0239 173 CDD RRM_RBM18 14 93 IPR039157 -
Acco01g0239 173 Gene3D - 10 103 IPR012677 -
Acco01g0239 173 SMART rrm1_1 14 90 IPR000504 GO:0003723
Acco01g0239 173 SUPERFAMILY RNA-binding domain, RBD 5 100 IPR035979 GO:0003676
Acco01g0239 173 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 51 153 - -
Acco01g0239 173 MobiDBLite consensus disorder prediction 139 153 - -
Acco01g0239 173 MobiDBLite consensus disorder prediction 139 160 - -
Acco01g0239 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 87 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0239 Acco-ChrAcco01 2640875 2642161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0239 13 95 Eukaryotic Initiation Factors Gene Family AT1G71770 40.964 3.78e-12 61.6