Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0230 ATGGTTTCCAAAAACCCAAACCCCCCGGAAGGCTTCTACTTGGATCCCCCTGGCATGGCGCTTCCTGGCCTTGGTGCCTTCGCTTCCGTCACCACTGCCGCCACAACTACCACCTCTGCTTCCGCGGCTAATTCATCGGACGACCCTTCCAAGAAGATCCGGAAACCGTACACTATAACCAAGTCCCGGGAGAGCTGGAGCGAACCCGAGCACGACAAATTCTTCGAAGCCCTACAACTTTTTGACCGTGACTGGAAGAAGATCGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGTAGCCATGCACAGAAATATTTTCAAAAAGTTCAGAAGAGTGGAGGAAATGAGCACCTACCTCCACCCAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCCAAAAATGCTTTGGTAAACTCCCAAATACCAGGATCCTTTCAGTCTTCGTCTCCTCTGGTTGAACCTGGATATATAATAAAGCCTGATGCCTCTGCAATGATCAAAACTCCAGCTACTAACGCTGCAATGTCTTCTCGGCCAAACAACACTTTGCAGACAACTAATTTGCTGCATGGGCCCAAAATGAATAATAGTTGCAGTAGCAGTGAGAGCACTCGGAGGGCACGGCCAATTGGTGTATCTACTGGTCAAGGGAATAATAGCTATCCATTGAGAGTTCTGCCAGACTTTGCACAAGTTTACAAGTTCATTGGCAGTGTATTTGACCCAAAAGCCACTGGGCATCTGCAGAAACTGAAAAAGATGGATCCTATAGATGTTGAGACGGTACTACTATTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGATCATAGAAGGTTGCTCTCTTCTTATGAGGTGGAACCAGGGACAATCTAG 906 0.4647 MVSKNPNPPEGFYLDPPGMALPGLGAFASVTTAATTTTSASAANSSDDPSKKIRKPYTITKSRESWSEPEHDKFFEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFQKVQKSGGNEHLPPPRPKRKAAHPYPQKASKNALVNSQIPGSFQSSSPLVEPGYIIKPDASAMIKTPATNAAMSSRPNNTLQTTNLLHGPKMNNSCSSSESTRRARPIGVSTGQGNNSYPLRVLPDFAQVYKFIGSVFDPKATGHLQKLKKMDPIDVETVLLLMRNLSINLASPDFEDHRRLLSSYEVEPGTI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0230 301 Gene3D - 66 113 - -
Acco01g0230 301 CDD SANT 65 108 IPR001005 -
Acco01g0230 301 FunFam protein REVEILLE 6 isoform X1 65 113 - -
Acco01g0230 301 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Acco01g0230 301 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Acco01g0230 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Acco01g0230 301 MobiDBLite consensus disorder prediction 35 56 - -
Acco01g0230 301 PANTHER SWI/SNF COMPLEX-RELATED 34 280 - -
Acco01g0230 301 MobiDBLite consensus disorder prediction 110 138 - -
Acco01g0230 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 110 IPR006447 GO:0003677
Acco01g0230 301 SMART sant 62 110 IPR001005 -
Acco01g0230 301 MobiDBLite consensus disorder prediction 191 210 - -
Acco01g0230 301 ProSiteProfiles SANT domain profile. 61 112 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0230 Acco-ChrAcco01 2553242 2558170 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco01g0230 Myb_DNA-binding 4.6e-09 CL0123