Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0224 ATGTCTTCCAATATATCATCAATCATAAAAGAAAATCTCAAAAAACCGACCTCCTTCTTCGGCCTTCCATTATGGATTCTGCTTCTAGCTTTAATTGCAGCGATCATCATGCTCATGATTCTCATCGCTATCTGCATTTGCTTCATCTGCTTTCGTCGTCATCGTCGACGACGTCGTCACAGAAATCCTTACGATTCCCGATTTTCTTTGCCCAAACAAATTGCATCCAAGAATAACCGTCATCTTCGTCACGATTCCAGCTCGTTGTCCCGCGACAAGAAGCTACTCTCAGGCAATCTTGATGTCTCTGGAATTGTGATGAACTTCGACAGGTTCTTACCCAATAATGTCAATGGCGGTAGGGAAGATGGAGATTTAGAATCGATTGTTGGATGCTCACATAGGAGTAAGAATGTTTGCGGACAGATTATCAAATTCGGCTTGCAGGAGATCATGGAGGCGACGAATCAATTGGCCAAAGAGAATGTGATTGGAAGTGGCGATCGTGGAATTGTTTATCTAGGTTTGTTGGGGGATAATACTCGAGTGGCAGTGAAGATGCTTGTAAGCTACAGTGGTCAAACTGAGGATTTTGCACTGCAAATGGAGGCAATTGGATGCGCAAGACACAAGAAACTGGTCCAATTGTTTGGATATTGTACTGAGGGAGCTTACAGGATGTCAGTATCTGAATACATAAATAATGGAAATCTGTATCAATGGCTTCACCAGTTTCCAGGACAAGTCAGCCCTCTAACATGGGAAACCAGATTGAGTGTTATCCGGGGTGTGGCAAAAGGATTGGCCTACCTTCATGAGGACGTTGAACCCAAGATTCTCCATGGAAACTTAAAATCTAGTGATATTTTGCTTGATCACCAATGGAATCCCAAGATCTCTGATTTTGGCCTCACCAACCTTTCCACTGCTAAGTGTACTCCTAATTTGATGGAAACACTGAGTTGTATGGATCCCAAAAGTCTTTCCACTAGTGATTTCAGCGAGAGCAATGACATTTATAGTTTCGGAGTTCTTATAATGGAGATTGTATCAGGAAGGACTCCTTCAGATCATAGTCTACCCCAGGAAGATTTAGTTGTCTGGTTTAAGTCAGAGATAGGAAATGAAAATCTTGACCACCTAGTGGACTCAAAATTGCCTGAAATGACTCCTTCCAAGGAACTCAAACAGATTATTTTGGTTTCACTTCGATGTGTTGATCCTGACGTGAATCCAAAACTCAAAATGGGAAATGTGATTCGCATGCTTGAGCCTCGCGACCTGCTTCTTTCTAATGAACATGACATTGCTAGGGAAGTGCATGAATTCAATCGCTCGCCACAAAGTGACCCTGCATCAGAATTAGGTGACAGTCCTTAA 1380 0.4246 MSSNISSIIKENLKKPTSFFGLPLWILLLALIAAIIMLMILIAICICFICFRRHRRRRRHRNPYDSRFSLPKQIASKNNRHLRHDSSSLSRDKKLLSGNLDVSGIVMNFDRFLPNNVNGGREDGDLESIVGCSHRSKNVCGQIIKFGLQEIMEATNQLAKENVIGSGDRGIVYLGLLGDNTRVAVKMLVSYSGQTEDFALQMEAIGCARHKKLVQLFGYCTEGAYRMSVSEYINNGNLYQWLHQFPGQVSPLTWETRLSVIRGVAKGLAYLHEDVEPKILHGNLKSSDILLDHQWNPKISDFGLTNLSTAKCTPNLMETLSCMDPKSLSTSDFSESNDIYSFGVLIMEIVSGRTPSDHSLPQEDLVVWFKSEIGNENLDHLVDSKLPEMTPSKELKQIILVSLRCVDPDVNPKLKMGNVIRMLEPRDLLLSNEHDIAREVHEFNRSPQSDPASELGDSP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0224 459 MobiDBLite consensus disorder prediction 440 459 - -
Acco01g0224 459 Gene3D Transferase(Phosphotransferase) domain 1 233 441 - -
Acco01g0224 459 PANTHER OS01G0323000 PROTEIN 7 441 - -
Acco01g0224 459 FunFam Putative receptor-like serine/threonine-protein kinase 233 438 - -
Acco01g0224 459 SUPERFAMILY Protein kinase-like (PK-like) 141 424 IPR011009 -
Acco01g0224 459 ProSiteProfiles Protein kinase domain profile. 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0224 459 Gene3D Phosphorylase Kinase; domain 1 129 232 - -
Acco01g0224 459 Pfam Protein tyrosine and serine/threonine kinase 160 416 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0224 Acco-ChrAcco01 2526309 2530521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0224 132 424 Trihelix Transcription Factor Family AT5G38560 35.738 1.13e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco01g0224 PK_Tyr_Ser-Thr 1.8e-34 CL0016