Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0205 ATGGGTTCGTTTCTTCTTCTCTGCGCAATTCTAGTGTTTTCTTTTGTACGAAAGGTTTCTGTTGAGGCGCTGAGTGCATTGAAGAAGAACATGAACGATCCTAACGGTGTTCTTCGAAACTGGGATTCTGCCATAGTGAATCCCTGCACCTGGTTCGGTGTTCAATGCGATGTTGGAAGTGTCACTCGTATTGATATTGGTAATGCCGGCCTATTAGGTGAACTAGTTGCAGAGCTTGGTGAGCTCAGAAATTTGCAGCAATTGCGTCTCAATAATAACAACTTATCAGGAAAAATTCCTGTATCTTTGACTGGTCTAAGATTACTGCAAGTCCTTGATCTCTCGAACAACCAGTTAAGTGGAGACATACCAGTTGGCGGTTCCTTTTCATCATTTTCTACCTCCAGTTTTTTAAATAATCCCGGACTAAGAGCAACAAATGGACCTCCACCACCTCTAACGCCACCATCTCGTTCAGGTAACGGTGATGCTGCAGCAATTGCAGGAGGAGTTGCTGCTGGCACTACGTTGTTATCTGTAACCTTCATTATTACTGTCCTTATATATTGCAGAAGAAGGAAATCACAAGTACATTTCTTTGATGTTGCTGCTGAGGATCCTGCTGGTGCAACTGATCATAATAACCTTGGTCGGCTTAAGAGGTTCTCTCTGCTGGAGCTACGAGTAGCAACAGAAGACTTCAGTTGCAGAAACATTCTGGGGGTAGGGGGATTTGGTAGGGTCTATAAAGGACGCCTAGCAGATGGTTCTCTTGTAGTAGTGAAGAGACTGAAAGAGGAAACAGCACGTAAAGGCGATGGAGAAGTGCAATTTCAAAGAGAAGTGGAAATGATAAGCATGGCTGTGCATCGAAACTTGCTTCGCCTTCTTGGCTTTTGCTCTACACCCACTGAACGCTTGCTTGTTTATCATCTCATGGTTAATGGTAGTGTGGCCTCATGCTTACAAGGGCGTCCAGAGTCAAAACCTGCATTAAACTGGTTAACTCGGAAGCGTATAGCAGTGGGAGATGCACGGGGACTTGTTTATCTGCATGATCATTGTGAGCCAAAGATTATTCATAGAGATATTAAAGCAGCAAACATATTGTTAGATGAGGAATATGAAGCCGTTGTAGGAGATTTTGGTTTAGCAAAACTTATGGATTACAAAGACACTCATGTTACAACTGAAAAACCTTTTGACCTCGCTCCACTTGCACTGGATAATGATCATATCATGTTGCTTGACTGGGGTATTTGTGAGGAAGAAGAAGTTGAAGACGTAATAAAAGTATGTTTACTGTGCACACAAAGCAACCCATTGAGAAGGCCAAGAATGGCAGAAGTGGTGAGAATGCTGGAAAGTGAGGGTTTGCAACATCAAGAGTGGGAACAAGGGCCGAAAGAGATGTTGCAGAAAGATTATGTTGATTTTAATATCAGCAGCCATCAGACCGATAATAATCAAAATGCTGAATGTACTTTAAACTCAACTTCATCTGTAGTAGCAGAAGAACTTTCAGGTCCACGATGA 1536 0.4264 MGSFLLLCAILVFSFVRKVSVEALSALKKNMNDPNGVLRNWDSAIVNPCTWFGVQCDVGSVTRIDIGNAGLLGELVAELGELRNLQQLRLNNNNLSGKIPVSLTGLRLLQVLDLSNNQLSGDIPVGGSFSSFSTSSFLNNPGLRATNGPPPPLTPPSRSGNGDAAAIAGGVAAGTTLLSVTFIITVLIYCRRRKSQVHFFDVAAEDPAGATDHNNLGRLKRFSLLELRVATEDFSCRNILGVGGFGRVYKGRLADGSLVVVKRLKEETARKGDGEVQFQREVEMISMAVHRNLLRLLGFCSTPTERLLVYHLMVNGSVASCLQGRPESKPALNWLTRKRIAVGDARGLVYLHDHCEPKIIHRDIKAANILLDEEYEAVVGDFGLAKLMDYKDTHVTTEKPFDLAPLALDNDHIMLLDWGICEEEEVEDVIKVCLLCTQSNPLRRPRMAEVVRMLESEGLQHQEWEQGPKEMLQKDYVDFNISSHQTDNNQNAECTLNSTSSVVAEELSGPR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0205 511 MobiDBLite consensus disorder prediction 140 161 - -
Acco01g0205 511 SMART serkin_6 234 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0205 511 Pfam Protein kinase domain 238 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0205 511 SUPERFAMILY Protein kinase-like (PK-like) 216 455 IPR011009 -
Acco01g0205 511 Gene3D Ribonuclease Inhibitor 19 136 IPR032675 -
Acco01g0205 511 FunFam Os07g0541700 protein 313 401 - -
Acco01g0205 511 Gene3D Transferase(Phosphotransferase) domain 1 313 408 - -
Acco01g0205 511 Pfam Leucine rich repeat N-terminal domain 21 57 IPR013210 -
Acco01g0205 511 ProSiteProfiles Protein kinase domain profile. 234 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0205 511 FunFam Leucine-rich repeat receptor-like kinase 19 141 - -
Acco01g0205 511 Pfam Leucine rich repeat 82 119 IPR001611 GO:0005515
Acco01g0205 511 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 463 - -
Acco01g0205 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672|GO:0006468
Acco01g0205 511 FunFam Somatic embryogenesis receptor kinase 1 199 312 - -
Acco01g0205 511 SUPERFAMILY L domain-like 21 125 - -
Acco01g0205 511 Gene3D Phosphorylase Kinase; domain 1 204 311 - -
Acco01g0205 511 ProSitePatterns Protein kinases ATP-binding region signature. 240 271 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0205 Acco-ChrAcco01 2337119 2343475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0205 22 511 Receptor kinase-like Gene Family AT1G71830 46.840 1.26e-158 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Acco01g0205 Pkinase 3.7e-28 CL0016