Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0202 ATGGAACAAAAGAGCATTTTGTTGTCGGCATTGAGTATCGGGGTTGGTTTAGGGGTAGGGATCGGGTTGAGCCAGGGTCAAACCATGCAGAAATGGGTTGGCGGGAACCGTGAGTCTCAAGAGCTTACCGGGGAGCTGCTTGAGAAGGAACTCAAGAGCCTCGTGGTTGATGGAAAGAGCTGCAATGTCACTTTGGAAGATTTTCCTTATTACTTGAGTGAAAGAACTAAAGCCTTGCTGACAAGTGCTGCGTACGTTCATTTAAAACAACATGACTTCTCAAAACACACCCGAAACCTTTCACCTGCAAGCCAATCTATATTACTTTATGGACCTGCAGAATTGTACCAACAGATGCTTGCTAAAGCTTTGGCTGATTACTTTGAGTCAAAGTTACTTTTGCTTGATGTTGCTGACTTCTCTAGGATGATGCAGAGTAGATATGGATGTGCAAAAAGGGAATCATCTTTTAAAAGGTCCCTATCTGAGTTGACTTTGGAAAGAATGTCCAGTTTGTTCGGTTCCTTGTCAATCCCTTCACCCAGTGATTATAAAGGAACTTCACGTCGACAAATTAAAGGTAACGAAGCTTCTGATAATCCGCCAAAACTCCGAAGGAATGCCTCTTCTGCAGCTGATATGAATAGCATTTCTTCATATTCTGGATCAACAACTTCAGGTCCCCAGAAGCGCCCAAGTAGTTTATGCTTTGATGAGAAATTGTTTCTGCATTCACTCTATAAGGTCTTGGTTTCTGTATCTGAAATCAGCCCCATAATCCTATACATTAGAGATGCTGAGAATCTTTTTCTCAACTCACACGCGCTATACACTTTGTTCCAAAGAATGTTTAAAAAGATTTCAGGGTCAGTGTTGATACTTGGTTCCCAAATATTAGATTCAGAAGATGGTGGCAGAGATATTGATGAGAGGCTCACTATGTTATTTCCTTACACCATCGAGATCGAATCGCCTGACGATGAGGCCAACAGTGGCAGCTGGAAAGCCAAGCTGGAAGAGGACATGAAAGTTCTTCAGTTTCAAGATTGCAGAAACCACATTGCTGAAGTACTTGCTGAAAATGACATTGAATGTGATGATTTGAACACTATCTGTCACTCAGACACAATGGTCCTAAGTCAATATATTGAAGAGATTGTGGTATCTTCAATATCTCACCATTTGATGAATCACAAACATCCAGAATACCGAAATGGGAAGTTAATCATATCAGCCGACAGTTTGTCCCATGGATTGAGCCTGTTCCAAGAAGGAAAAACCAGTGGGACTGGTAATCTGAAGTTGGAAAACAATGTCCCTAAGAAGGACACTGGTGGAGAAGGAATTGCTGATGACGAAAAGAAAAGTGGAACAGAAAAATCTATCCCTGTGACAAAAAAAGATGGCGAGAACACTGCTTCTGTTCCAGCGAAAGCAGAAGTTCCTGACAATGAGTTTGAGAAGCGAATAAGGACTGAGGTTATACCTGCAAATGAGATAGGGATTACATTTGCAGACATTGGTGCACTTGATGAAATTAAGGAATCGCTTCATGAGATGGTAATGCTTCCTCTTCAGAGACCAGACCTTTTCAAAGGTGGTCTTCTTAAGCCATGTAGAGGCATATTGCTTTTCGGGCCCCCAGGTACTGGGAAAACTATGATGGCAAAGGCAATTGCGAATGAAGCTGGAGCAAGTTTCATCAATGTGTCAATGTCCACCATTACTTCAAAGTGGTTTGGGGAAGATGAGAAGAATGTCCGAGCTCTGTTCACACTTGCAGCAAAGGTTGCCCCTACAATAATATTTGTTGATGAAGTTGACAGTATGCTAGGACAGAGAGCAAGAAATGGAGAACATGAAGCCATGAGGAAGATAAAAAATGAGTTCATGACCCACTGGGATGGCCTATTGACAAAACCTGGTGAAAAGATTCTTGTACTAGCTGCAACCAACAGGCCATTTGACCTCGATGAAGCAATCATAAGACGGTTCGAGCGTAGAATCATGGTTGGTCTTCCATCTGTTGAGAGCAGGGAACAAATCTTAAAAACCCTCTTATCTAAAGAAAAACATGAAGACATGGACTTCAAAGAGCTCGCGGTCATGACAGAAGGATATAGTGGAAGTGATCTCAAGAACTTATGCATGACGGCTGCATATCGATCTGTCAAGGAGCTCGTGCAGAAGGAAATTTTGAGGGAAAAGGAAAAGAAGAAAAGAGAGGGAGAAGCCGAAAGCTCCGAAGATGCTACAGATAATAAGGAAAGTGAAAAAGATGAAGACATTACCCTGAGGCCTTTAAACATGGAAGACATGAAATATGCCAAGTCTCAGATTGCTGCAAGTTTTGCTTCTGAAGGATCAGTAATGAGTGAGCTGAAGCAGTGGAATGATTTGTACGGAGATGGAGGTTCAAGGAAGAAACAGCAGCTTTCGTACTTCCTCTAG 2451 0.4215 MEQKSILLSALSIGVGLGVGIGLSQGQTMQKWVGGNRESQELTGELLEKELKSLVVDGKSCNVTLEDFPYYLSERTKALLTSAAYVHLKQHDFSKHTRNLSPASQSILLYGPAELYQQMLAKALADYFESKLLLLDVADFSRMMQSRYGCAKRESSFKRSLSELTLERMSSLFGSLSIPSPSDYKGTSRRQIKGNEASDNPPKLRRNASSAADMNSISSYSGSTTSGPQKRPSSLCFDEKLFLHSLYKVLVSVSEISPIILYIRDAENLFLNSHALYTLFQRMFKKISGSVLILGSQILDSEDGGRDIDERLTMLFPYTIEIESPDDEANSGSWKAKLEEDMKVLQFQDCRNHIAEVLAENDIECDDLNTICHSDTMVLSQYIEEIVVSSISHHLMNHKHPEYRNGKLIISADSLSHGLSLFQEGKTSGTGNLKLENNVPKKDTGGEGIADDEKKSGTEKSIPVTKKDGENTASVPAKAEVPDNEFEKRIRTEVIPANEIGITFADIGALDEIKESLHEMVMLPLQRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRARNGEHEAMRKIKNEFMTHWDGLLTKPGEKILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESREQILKTLLSKEKHEDMDFKELAVMTEGYSGSDLKNLCMTAAYRSVKELVQKEILREKEKKKREGEAESSEDATDNKESEKDEDITLRPLNMEDMKYAKSQIAASFASEGSVMSELKQWNDLYGDGGSRKKQQLSYFL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0202 816 ProSitePatterns AAA-protein family signature. 645 664 IPR003960 GO:0005524|GO:0016887
Acco01g0202 816 MobiDBLite consensus disorder prediction 181 231 - -
Acco01g0202 816 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 815 - -
Acco01g0202 816 Pfam ATPase family associated with various cellular activities (AAA) 542 672 IPR003959 GO:0005524|GO:0016887
Acco01g0202 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 724 IPR027417 -
Acco01g0202 816 MobiDBLite consensus disorder prediction 181 195 - -
Acco01g0202 816 MobiDBLite consensus disorder prediction 736 768 - -
Acco01g0202 816 MobiDBLite consensus disorder prediction 202 231 - -
Acco01g0202 816 MobiDBLite consensus disorder prediction 445 466 - -
Acco01g0202 816 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 501 676 - -
Acco01g0202 816 Gene3D - 674 778 - -
Acco01g0202 816 SMART AAA_5 538 675 IPR003593 GO:0016887
Acco01g0202 816 Pfam AAA+ lid domain 694 731 IPR041569 -
Acco01g0202 816 MobiDBLite consensus disorder prediction 426 475 - -
Acco01g0202 816 Gene3D - 502 783 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0202 Acco-ChrAcco01 2313508 2320016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0202 449 759 Calmodulin-binding Proteins AT3G56690 36.025 1.75e-46 177