Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0169 ATGAATGATCCACGTTTGGCTGCAACAGAAGGCTCAGCAACAGAGAACCCATATACTCAAAATATGAGCCTCCCTATCTCGGAGCTCTCGGGAGATTCAGAAGAACACTTGGTTCAAATGATCACTAGCTTTGCCCACTCTCTATCCCATAACAAAATGCGCTGTTTGGGCTACCCCGTAAATCTTGAGTTTGACTATGGAGCATTGGCACCGTTGCTGCATTTTCACATAAACAATGCTGGAGACCCATTTGTGGGAAATAGCTACACTCTCAACTCAGTAGCTTTTGAAGTTTGTGTTCTTGACTGGTTCACCAGATTGTGGGAGATTGAGAAGAACCAGTATTGGGGATACGTTACCACCGGTGGAACTGAAGGCAATCTTCATGGGATTTTATTAGGGAGGGAACAATTGCCAGATGGGATTCTGTATACGTCAGAAGAATCACATTATTCAGTGTTCAAGATAGCAAGAATGTGCAGAATTGAATGTGTGAAGGTTGCAACTCTGAGATCTGGTGAGATTGATTGTTCTGATCTCAAGGCTTCACTTCTTGCTCACAAGGACAAACCTGCCATCATCAACCTCAACATAGGAACAACTATGAAGGGAGCTATTGATGATCTTGATCTTGTCGTACAAACACTGGAAGAATGTGGTTTTAGTCGTAATAGGTTCTATATTCATTGTGATGGAGCTCTGTTTGGACTAATGCTTCCTTTCATTAAACAAGCACCAAGGTTAAGTTTCAAGAAACCCATAGGAAGCTTAGCTATATCTGGGCACAAGTTCATAGGATGTCCTGTTCCTTGTGGGGTTGTAATAACTCGTTTGGTACATATGAATGGCATGTCAAGAGATACTGAGATCATAGCTTCAAGAGACGCCACAATCACAGGAAGTCGAAACGGCCACGCTCCGATCTTCCTCTGGTACGCTCTTAAGAAGAAGGGCTTATTGGGGCTCAAGAAGGAAGTGGACAAGTGTATTAGGAATGCAGATTACTTGCACAACAAGCTACGAGAAGCAGGAATAGTGAGTGCGATGAAGAATGAGTTCAGCAATATTGTGGTGTTTGAGAAGCCTCAAGATGATGAATTTGCTCGTCGGTGGAGTCTGGCTTGCAAAGGAAATATGGCACATGTGGTAGTGATGCAGCATGTGACTGTTGAAATGTTGGACTCCTTTGTCACTGAGTTTCTTCAAAAGAGATCCTTTAAGCACCAAATTAATAAACACTAG 1242 0.4283 MNDPRLAATEGSATENPYTQNMSLPISELSGDSEEHLVQMITSFAHSLSHNKMRCLGYPVNLEFDYGALAPLLHFHINNAGDPFVGNSYTLNSVAFEVCVLDWFTRLWEIEKNQYWGYVTTGGTEGNLHGILLGREQLPDGILYTSEESHYSVFKIARMCRIECVKVATLRSGEIDCSDLKASLLAHKDKPAIINLNIGTTMKGAIDDLDLVVQTLEECGFSRNRFYIHCDGALFGLMLPFIKQAPRLSFKKPIGSLAISGHKFIGCPVPCGVVITRLVHMNGMSRDTEIIASRDATITGSRNGHAPIFLWYALKKKGLLGLKKEVDKCIRNADYLHNKLREAGIVSAMKNEFSNIVVFEKPQDDEFARRWSLACKGNMAHVVVMQHVTVEMLDSFVTEFLQKRSFKHQINKH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0169 413 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 256 277 IPR021115 GO:0016831
Acco01g0169 413 MobiDBLite consensus disorder prediction 1 20 - -
Acco01g0169 413 Pfam Pyridoxal-dependent decarboxylase conserved domain 24 359 IPR002129 GO:0016830|GO:0019752|GO:0030170
Acco01g0169 413 PANTHER - 18 409 - -
Acco01g0169 413 SUPERFAMILY PLP-dependent transferases 51 400 IPR015424 -
Acco01g0169 413 Gene3D - 73 314 IPR015421 GO:0003824
Acco01g0169 413 Gene3D Aspartate Aminotransferase, domain 1 315 404 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0169 Acco-ChrAcco01 1790465 1795187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0169 155 332 Calmodulin-binding Proteins AT1G65960 26.562 2.41e-08 53.5