Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0166 ATGAAGAGTTCACTTTGCTGTTTGGCCAAGAATAGGGCTTATGTTGCAATGATCTTCACTCAGTTTATTTATGCAGGCATGGCTTTGTTGTCCAAAGCTGCAATCGCCAAGGGAATGAACCCTTACGTGTTTGTTGTTTACCGGCAAGCTTTCGCCTCGCTTGCCCTGTCTCCATTCGCATTCTTCGACAGGTTCTTCGTTCACTGTGTCTTTTTCATGAAACAAGGTGCTCCATTGTCGTACAACTTGCTAAGCAAAATCTTTCTTGTTTCCTTAGTTGGGTTAACACTAAGTTCAAATCTTTACTATGTGGCAATCAACTATACCACTGCAACATTTGCTGCAGCCACCACAAACACCATCCCTGCCATAACTTTCATCATGGCTGTTACTTTCAGGGTGGAAAGAATTTCCGTGAAGCATATTCATGGGATTGCCAAGATTTTGGGTTCAATTTTGAGCCTTTCTGGGGCAATAATATTTGCTTTGATCAAAGGACCTTCAATAGGTTTCAAGAACTGGCATCCATCAATAACAGCCCCTCACTCTAAAGGAGATCAAGTTAAAGGAGTTATTATGATGCTCTCAGCAAACACCGCTTGGTCTTTTTGGCTTATTTTGCAGGGATTTATTGTAATGGAATATCCCGCAAAATTTCGCCTGACTACACTGCAGTGCTTCTTTAGCTGCATACAGACAGTTGTTTTGGCTGTCACGGTTGAAAGGGATCCTTCGGCGTGGAAGCTTGGATGGGACATTCATCTTCTTTCTGTGGCTTATTGTGGTGTGATTGTGGCAGCAATTACGTATTGGCTCCAAGTGTGCACTATAGAGGATAAAGGCGCAGTATTCACAGCAACGTTCACTCCTCTCTCTCTTATTATCACTGCCTTCTTCTCTGCACTTTTTTGGAGAGAATCACTTCACTGGGGAAGTGCGGGTGGAACCATTTTGCTTGTCATTGGACTTTACAGTGTGCTGTGGGGAAAGAACAGAGAAACTGAAAAAGTCCAAAACCATGAAAAGACACAACGACCAAAAGATCATCATCAGGACACCACATTAGAGTTATCATCACAAATCTGA 1086 0.4273 MKSSLCCLAKNRAYVAMIFTQFIYAGMALLSKAAIAKGMNPYVFVVYRQAFASLALSPFAFFDRFFVHCVFFMKQGAPLSYNLLSKIFLVSLVGLTLSSNLYYVAINYTTATFAAATTNTIPAITFIMAVTFRVERISVKHIHGIAKILGSILSLSGAIIFALIKGPSIGFKNWHPSITAPHSKGDQVKGVIMMLSANTAWSFWLILQGFIVMEYPAKFRLTTLQCFFSCIQTVVLAVTVERDPSAWKLGWDIHLLSVAYCGVIVAAITYWLQVCTIEDKGAVFTATFTPLSLIITAFFSALFWRESLHWGSAGGTILLVIGLYSVLWGKNRETEKVQNHEKTQRPKDHHQDTTLELSSQI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0166 361 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Acco01g0166 361 Pfam EamA-like transporter family 13 155 IPR000620 GO:0016020
Acco01g0166 361 PANTHER WAT1-RELATED PROTEIN 14 339 IPR030184 GO:0016020|GO:0022857
Acco01g0166 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 332 - -
Acco01g0166 361 MobiDBLite consensus disorder prediction 337 354 - -
Acco01g0166 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Acco01g0166 361 MobiDBLite consensus disorder prediction 337 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0166 Acco-ChrAcco01 1711536 1714697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0166 7 360 Nodulin-like Gene Family AT2G37460 33.705 4.76e-74 232