Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0165 ATGCAACTGGGAGATCCAAGTGTGTTAGAGACCTCCTCCGGCGAGACCACGATGGCCAACGTGACGGCGACTGCGCCACCAACAGAAGCCACGGCTGCTGACGGTGCTGCAGAAATCGAGATGATGGATAGTATCGTTGCTCTGGATGCTACAAATTCAGGTGATGATATTGATCAGAAGAGAAGTGGTGGCGGCAGTGGAGGTGGAGGAGGAGGCGGCGGCAACCGGTGGCCTCGCCAAGAAACCTTCGCTCTCTTGAAGATAAGGTCAGATATGGACGCTGCGTTTCGGGATTCCAGTCTTAAAGGTCCACTTTGGGAACAAGTTTCAAGGAAAATGGCAGAACTTGGATATAATCGAAGCGCAAAGAAATGCAAAGAGAAGTTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAAGCAGAAGTGGTAAACCAGAAGGCAAAACCTACAAATTCTTTGATCAATTACAAGCCCTTGAAAATAAATTCACTGTCTCTCACCATCATCATCACACTCCGTCAAAACCGCCACCACCTCCGCCGCCGCCACAATCTCAACCTTCTTTCCAAACATGGTCTGGCAATATTAATAATAATGATCCTACTCCTACCACAGCTACTATCTCTTACGTCACTACTATTCCATCCAATGTAAACCCTACTCTCATTTCTCCGCCGCCGGCGGTGCCACAGCCGGTGAATATTGTTGCTGCCACCATCACCAACCCTAGGAATTTGTCGAACAAGAGCCTTTTCTCGTCAATCACGACGACCACGTCGACCTCGTCGTCGACGGCATCTGATGAGGACATGGAAGAGAAGTATAGGAGGAAGAGGAAGATGAAGGACTACTTCCGGAGGCTGACGAGGCAAGTGCTGGCGAAGCAGGAGGAGATGCAGAAGAGGTTTCTAGAAGCCATAGAGAAGAGAGAGCGGGAGCGAGAAGCACAGTTAGACGCTTGGAGGGCTCAAGAAATGGCCAGGATCACCAGAGAGCATGACATTCTTGTCCAAGAAAGATCCACCACCGCGGCCAAGGACGCCGCCCTCATTGCCTTCCTCCAGAAGTTATCCAGCGGCCAGCAAAATCCAGCACCGCCACCACCACCTCCTCCGGCTCCACCACAGCAACTTGTAATGCAAGCCGTAGAACAACCTCGTGAACAACTGCAATTGCTGCCTATTGACAAGAAGTTCGAAATACAGAAAGTGAACATAACCAACGGTCATCATAGTAACAATAATAATCAGGTGAGTGTTTCTAATTCTTCTTCTTCTTCTTCAAGGTGGCCAAAGCCAGAAGTTCATGCATTAATAAGGCTAAGGACAAGTATGGACCCAAAGTATCAAGATAATGGACCAAAAGGACCATTGTGGGAGGACATATCGGCCGGAATGCAGCGGCTAGGGTACAACCGGAGCGCGAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAAAGGCGTGAAGATAGCAAGACTTGTCCTTATTTTCAAGAGCTTGAGGCTCTTTACAAGGAGAAGAGCAAAACCAACAACAGTAATAGTATGAGTGTCATCTTCGGGGGCGCGGCCACCGGGACTCGCGAAATGATGATGGAGCCGTTGATGGTGCAGCCGGAGCAGCAATGGAGGCCGCCTCCGCCACATGTGGAGGAGGAGGGTGGTGGTGCTGGGAGGGAGAATAACAGTGCAAATAATGCTATGTTTCATTACGAAGAGAAAGAAAGAGACGGAGAAGAAGATCTAGTAGAGGAGATGGAAGAAGATGATGATGATGATGTTGAGGAGGAAGAAGATAGTATGGAAGATGGTGATCAACAAGGACGTTATGAGGTTGCAGCGACAAGTAATAATAAAATTGCTTCCGTGGATACTGTTGAATGA 1926 0.4849 MQLGDPSVLETSSGETTMANVTATAPPTEATAADGAAEIEMMDSIVALDATNSGDDIDQKRSGGGSGGGGGGGGNRWPRQETFALLKIRSDMDAAFRDSSLKGPLWEQVSRKMAELGYNRSAKKCKEKFENVYKYHKRTKESRSGKPEGKTYKFFDQLQALENKFTVSHHHHHTPSKPPPPPPPPQSQPSFQTWSGNINNNDPTPTTATISYVTTIPSNVNPTLISPPPAVPQPVNIVAATITNPRNLSNKSLFSSITTTTSTSSSTASDEDMEEKYRRKRKMKDYFRRLTRQVLAKQEEMQKRFLEAIEKREREREAQLDAWRAQEMARITREHDILVQERSTTAAKDAALIAFLQKLSSGQQNPAPPPPPPPAPPQQLVMQAVEQPREQLQLLPIDKKFEIQKVNITNGHHSNNNNQVSVSNSSSSSSRWPKPEVHALIRLRTSMDPKYQDNGPKGPLWEDISAGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFQELEALYKEKSKTNNSNSMSVIFGGAATGTREMMMEPLMVQPEQQWRPPPPHVEEEGGGAGRENNSANNAMFHYEEKERDGEEDLVEEMEEDDDDDVEEEEDSMEDGDQQGRYEVAATSNNKIASVDTVE 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0165 641 MobiDBLite consensus disorder prediction 592 618 - -
Acco01g0165 641 Pfam Myb/SANT-like DNA-binding domain 75 161 IPR044822 -
Acco01g0165 641 Pfam Myb/SANT-like DNA-binding domain 430 517 IPR044822 -
Acco01g0165 641 SMART sant 428 490 IPR001005 -
Acco01g0165 641 SMART sant 73 135 IPR001005 -
Acco01g0165 641 MobiDBLite consensus disorder prediction 553 641 - -
Acco01g0165 641 MobiDBLite consensus disorder prediction 409 434 - -
Acco01g0165 641 MobiDBLite consensus disorder prediction 1 27 - -
Acco01g0165 641 Gene3D - 432 493 - -
Acco01g0165 641 Gene3D - 77 138 - -
Acco01g0165 641 MobiDBLite consensus disorder prediction 409 433 - -
Acco01g0165 641 MobiDBLite consensus disorder prediction 624 641 - -
Acco01g0165 641 FunFam Trihelix transcription factor GT-2 432 493 - -
Acco01g0165 641 ProSiteProfiles Myb-like domain profile. 424 488 IPR001005 -
Acco01g0165 641 CDD GT1 431 495 - -
Acco01g0165 641 PANTHER FI21293P1 34 572 - -
Acco01g0165 641 MobiDBLite consensus disorder prediction 1 31 - -
Acco01g0165 641 MobiDBLite consensus disorder prediction 167 208 - -
Acco01g0165 641 FunFam Trihelix transcription factor GT-2 77 138 - -
Acco01g0165 641 Coils Coil 295 326 - -
Acco01g0165 641 CDD GT1 75 140 - -
Acco01g0165 641 ProSiteProfiles Myb-like domain profile. 75 133 IPR001005 -
Acco01g0165 641 MobiDBLite consensus disorder prediction 190 208 - -
Acco01g0165 641 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0165 Acco-ChrAcco01 1667529 1670190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0165 71 557 Trihelix Transcription Factor Family AT1G76880 50.602 1.43e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco01g0165 Myb_DNA-bind_4 1.6e-21 CL0123