Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0163 ATGGAAGGAAATTTATCTCAAGGAGGTATTGTTCCAGTTGGTGCTTCTTTTAGTGGTTTTGATTTGTCAGGATCAATGCGTGTTCATCAGCAAGCTGAGCATCCCCACAATATGCACCAACCTCAAACACATCTACGCCAAGGGTCTTCAGTGCATTCCACCTGCCATGATGGTTTTCCTCTTGCCATGGGAACCTTGCAAAACTGTGATCAAACCATTTCAATGGCTGACTTTACTAAGGGAGATAGGAGCAAGAACTCAGCAAGTGAAGATGATGAACCAAGCTTGACTGAAGATGGAGCTGATGGTCGCAATGAAGCAGTCAGAGGGAAAAAGGGTTCACCTTGGCAGCGTGTGAAGTGGACTGATGAGATGGTGAAGCTTATGATAACAGCTCTCTCTTATATAAGCGAGGATTCAAATTCTGACGGTGGTGTTGGAGGTAGAAGAAAGTTTGCTGTCCTACAAAAAAAGGGCAAGTGGAAATCTATTTCTAAGGTCATGGCTGAAAGGGGTTACCGTGCTTCACCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAGACTTAATGACATGATTGGGAGGGGCACTTGTTGTCAAGTTGTTGAGAACCCTGCTCTGTTGGAAGTACTGGATTATCTTTCTGAGAAGGATAAGGAAGATATTAGGAAAATACTGGGCTCAAAACACTTGTTCTATGAAGAGATGTGTTCGTATCATAATGGAAATAGATTACATTTACCTCATGATCCGGCATTGCAGCGTTCACTACAAGCAGCTCTTAGAAATAAGGATGACCATGATAATGATGATGTCAAAAGGTCCTATCATGATGATCATGAAGAAGATGATCAAGATGTGGACACTGATGATCATGATGAATTTGAAGAGACATATGCTTCACATCGAGATAATAGAGGAATATATGGTGCGTTAGGGGTAGCTGTGAAGAAATTGAAACATGGTCAAGGTCTAGAAGATACTAAAATGTCTGGAAATTCCTTGAATTGTCAAGACTGCAATAAAAATCCTGATTCCCATGGACCGATATTCCAATACGATGTGAATCAAGGTTTACCTGAAGGCAAAAGAGCAGCTTGGTTGCAGAAGCAATGGATTGAATCTCGTAATCTTGAGCTAGAAGAGCAGAAACTTCAAATTCAGGTTGAAATGTTGGAACTGGAGAAACAGAGACTGAAGTGGCAGAGGTTTAGTAAGAAAAAAGACCGGGAACTGGAGAAACTGAGGATGGAAAATGAAAAAATGAAGCTTGAAAATGAGCGTATAGGTTTGGAACTGAAGAGAAGGGAAATGAGTGCTGGCTTTGACTAA 1347 0.4083 MEGNLSQGGIVPVGASFSGFDLSGSMRVHQQAEHPHNMHQPQTHLRQGSSVHSTCHDGFPLAMGTLQNCDQTISMADFTKGDRSKNSASEDDEPSLTEDGADGRNEAVRGKKGSPWQRVKWTDEMVKLMITALSYISEDSNSDGGVGGRRKFAVLQKKGKWKSISKVMAERGYRASPQQCEDKFNDLNKRYKRLNDMIGRGTCCQVVENPALLEVLDYLSEKDKEDIRKILGSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQAALRNKDDHDNDDVKRSYHDDHEEDDQDVDTDDHDEFEETYASHRDNRGIYGALGVAVKKLKHGQGLEDTKMSGNSLNCQDCNKNPDSHGPIFQYDVNQGLPEGKRAAWLQKQWIESRNLELEEQKLQIQVEMLELEKQRLKWQRFSKKKDRELEKLRMENEKMKLENERIGLELKRREMSAGFD 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0163 448 Coils Coil 380 407 - -
Acco01g0163 448 Coils Coil 410 439 - -
Acco01g0163 448 MobiDBLite consensus disorder prediction 266 286 - -
Acco01g0163 448 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Acco01g0163 448 Gene3D - 121 193 - -
Acco01g0163 448 MobiDBLite consensus disorder prediction 266 306 - -
Acco01g0163 448 MobiDBLite consensus disorder prediction 35 53 - -
Acco01g0163 448 PANTHER F16F4.11 PROTEIN-RELATED 1 445 - -
Acco01g0163 448 MobiDBLite consensus disorder prediction 83 116 - -
Acco01g0163 448 MobiDBLite consensus disorder prediction 80 116 - -
Acco01g0163 448 MobiDBLite consensus disorder prediction 31 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0163 Acco-ChrAcco01 1631801 1633147 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco01g0163 Myb_DNA-bind_4 7.3e-22 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0163 01 1631801 1633147 Acco01g0163 01 1631801 1633147 ECH