Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0157 ATGGGTAGAAAGAAACCGACTGCTCGTGACGATGATAATGTGCCCACTGCGTCTCAAGGCGGTGGAAAGTCGAAAAAGAAGGGGCTAGTGGTCGATGATGATGAGTATTCTATTGGAACGGAGCTTTCTGAGGAACCGTTGGTTCAAGAAGAGAAGCCTGTGGCTGCCGGAAAGAAGAAAGGTAAAAAAGGTAACTCGAAGGCTTCAAAAGTCGAGGGCGAAGATTTAGAAACGGCGATAGATAATGATGATATACCTGAAGTTGTGTTTACTGGGAAGAAGGGCAAATCAAAAAAGGGTGGTGGCAACAGTGTGTTTACTGCTTCGAGCTTCGGTTTGCTTGGTGATGAGGAGGGTGGAGAAGATGATGATGATGAAGACCAACAATCCGGCTTAACTGGTGGGGTGGACGATGATGACGATGAGGAACCGATTGTCAGTTTTTCAGGTAAGAAGAAGTCCTCAAAGGGTTCCAAGAAGAAGGGTGGTAGCTTGTTCACTGCATCAGCTTTTGATGCCATAGACGAAGATAATGAAGGGGAGGAGGTGATCGATAATTCGATGGAAGCCAGCCATGAAGAGAATGATGACGATGAACCAGTTATTGCTTTTACGGGTAAGAAAAAATCGTCGAAAGGTAGCAAGAAGGCTGGTGCCTTATTCACAGCATCCAGTTTTGGTGATACTGACGGAGAGCAGGACAAAGATGAACGAGAAGAGAGGGAAGAAGATGTCCCTCCGATCACTTTCTCAGGGAAGAAAAAGAAGTCATCGAAGTCTTCCAAGAAGGCTGTTAATTCATTTAGTGCAGCTTTGGCTGAAGAAGATGTGGATGAAGATTCTGTGGTTGAGTCTACCAGAGCTGATGAAGATAATGCTGAGGACGAAGATGTTTCTATCGTTGCTTTTTCAGGTAAAAAGAAATCTTCTAAGAAAAAGAAGACCGCTACTACCAAAATTAGTGATGATTTTGAGTCTGTTAATGAAAGTCAAGATGCTGTAGAGCCTGAGCAACCTAGCGTAATAAACAACAATAAAGGAAATAAGAGTGAAGCGGTGATTGAAACTTCAAAAAATAAAAAGAAGAAGAATAAAAAGAGTGGAGGAACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGAGGGTCCTCCGGTAAAGCCTGCTTCCCCTTCAGCAGAGGATGACAAAGTTCAGGCTCCTTCTGAAGTAGCTGCTCCTGCTCCTGCTGTGGTGGAAAAGGAAGGGGAAGGAGAGACAATGGAGTCAGTTGCTGCAAAAAAGAAGAAGAAGAATAGAAAGAGTGGAAGGACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTAGCTGAGCTTGGGGAGGGGCCTCCAGGAAAACCTGCTGCCCCTCCAGCTGAGGATGATAAAGTTCTGGCTGCTGCTTCTGAAGTAGCTGCACCTACTTCTGCTGTGGTAGAAAAAGAAGGGGAAGAAGACACGATGGAGTCAGCAGCAGCAAAAAAGAAGAAAAAGAAAAAAGAAAAGGAAAAGGAGAAGAAGGCAGCCGCAGTCGCAGCTGCTGCAAGTGCCCCCAAAGAAGAAGTTAAACCTGAGGCCTCAGAATCAAAGAAGAGTGATTCCAAGACTAAAGCAGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCATTGGCCCGAAGAAAAGAAACTGAAGAGAGGAAGAAAAGGGAAGAGGAGGAGAGGCTGAGGAAGGAAGAAGAAGAGCGCCGTAGGCAAGAGGAACTCGAGAGGCAAGCAGAAGAGGCTAGACGTAGGAAAAAGGAAAGGGAGAAGGAGAAGCTTCAGAAGAAGAAGCAAGAAGGGAAATTGTTGACTGGTAAGCAAAAGGAAGAAGCTCGTCGTCTGGAGGCCATGAGGAAGCAGTTTCTTGCTGGTACAGGGGTTGTCACTCTTCCTACTGGGGACTCTGGTGCACCAGCCAAACGACCCATATATCAGACAAAGAAGTCAAAACAAACCCATAATCATCAGAATGGCACTGCCCCTGTTAAGGCAGCTGAAGATGTGGAAGCAAATGAAAATCTGGAGACTCCTCCTGATGCTGAGTCATTGGAACCTGAGAAGGTTGAAGTGGTTGAGTCAGTGCTGGTTGAGGACAAAGGTACACCTGAAGATGTTGAAGAGGAAGAAGTTGAAGAAGATGAGGAGGAATGGGATGCAAAGAGTTGGGATGATGTTAATTTAAATGGAAAAAGTGCATTTGCTGACGAGGAGGCTGACTCTGAACCAGAAACCGTAGTGAAGAAGGAAATAAAAAATGCTGCACCACCAACTGTTGTCAAGTCAACAGGCACAGCTAAGAAAGCTGCTCCTCAGCCTCCAACTGAGAAAACTGAAAGTAAAAAGCAGGTTGAGAAGCAACTCCCAAATCAGGATCCACAAAATGCAACTGGGCCTTCTCAACCAAGTGGAGAGAACCTTCGGTCCCCAATTTGCTGTATTATGGGCCATGTAGACACAGGTAAAACTAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAAGGTGAGGCTGGTGGCATCACACAACAGATTGGTGCTACGTACTTCCCTGCTGAGAACATACGTGAAAGAACAAAGGAACTAAAAGCTGATGCAAAGCTGAAAGTTCCTGGTCTACTTGTGATAGATACTCCTGGGCATGAATCTTTTACCAACTTAAGGTCTAGGGGTTCTGGTCTCTGTGATATTGCAATTCTGGTTGTTGACATTATGCATGGATTAGAACAACAGACAATAGAATCACTCAATCTATTGAAAATGAGGAATACGGAATTCATAGTTGCATTGAACAAAGTTGACAGACTTTATGGTTGGAAAGTTTGCCGTAATTCTCCAATTGTTAAGGCATTGAAGCAGCAAACCAAGGATGTGCAAAATGAGTTCAATATGAGAGTTACTCAGGTTATCACTCAATTCAAGGAACAGGCGTTAAACACTGAGTTATACTATAAAAACAGAGAAATGGGAGAAACCTTCAGTATTGTACCTACTAGTGCTATAAGTGGTGAAGGTATCCCAGATATGTTATTGTTGTTGGTTCAATGGACACAAAAAACAATGGCTCAGAAACTTACATATAGTGATGAAGTGCAGTGTACAGTTTTGGAGGTGAAGGTTGTTGAAGGTCATGGGACAACTATTGATGTTGTCTTGGTTAATGGCGTTCTTCATGAAGGAGATCAAATAGTTGTATGTGGAATGCAGGGGCCTATTGTTACTACAATTCGAGCTCTGTTGACACCTCATCCTATGAAGGAGCTCCGTGTTAAGGGCACATATATCCATCATAAAGAAATTAAGGCTGCTATGGGTATCAAAATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGCACTTCTTTACATGTGGTGGAGCCTGACGATGATTTAGAAAGTGTTAAGGAAGCAGCTATGCAAGATATGAACCAAGTCATGAGCAGGATTGACAAGAGTGGTGAGGGAGTTTGTGTGCAGGCATCGACCCTTGGTTCTTTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTACATAGAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAAAGAGAGTTTGCTACTATCTTGGCATTTGATGTCAAAGTTAATCAGGAGGCTAAAGATCTTGCGGAAGAACTAGGTGTCAGAATTTTTATGGCTGATATCATTTATCACCTATTTGACCAATTCAAGGCCTATATTGACACCGTTAAGGAGGAAAAGAAGAGAGAAACAGCTGATGAGGCAGTCTTCCCATGTGTAATGAAAATCTTACCTGGTTGTGTTTTCATGAAGAAAGATCCGATTGTTTTGGGAGTTGAAATTCTTGAAGGTGTTTTAAAGGTTGGGACTCCGATTTGTATTCCTTCCAGAGATTACATTGACATTGGTCGCATTGCGTCCATTGAAAATAACCGTAAACCTGTTGAGGATGCCAAGAAAGGGCATAGTGTGGCCATTAAGATTGTTGGCACCAATTCGGAGGAACAACAAAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCGTATCTCAAGGAGATCTATCGATGTTCTCAAAGCTAATTATCGGGATGAGCTGACTATGGATGAATGGAGGCTGGTTGCGAAGTTGAAAACTGTTTTCAAGATACAATGA 4260 0.4347 MGRKKPTARDDDNVPTASQGGGKSKKKGLVVDDDEYSIGTELSEEPLVQEEKPVAAGKKKGKKGNSKASKVEGEDLETAIDNDDIPEVVFTGKKGKSKKGGGNSVFTASSFGLLGDEEGGEDDDDEDQQSGLTGGVDDDDDEEPIVSFSGKKKSSKGSKKKGGSLFTASAFDAIDEDNEGEEVIDNSMEASHEENDDDEPVIAFTGKKKSSKGSKKAGALFTASSFGDTDGEQDKDEREEREEDVPPITFSGKKKKSSKSSKKAVNSFSAALAEEDVDEDSVVESTRADEDNAEDEDVSIVAFSGKKKSSKKKKTATTKISDDFESVNESQDAVEPEQPSVINNNKGNKSEAVIETSKNKKKKNKKSGGTAQEEEDLDKLLAELGEGPPVKPASPSAEDDKVQAPSEVAAPAPAVVEKEGEGETMESVAAKKKKKNRKSGRTAQEEEDLDKLLAELGEGPPGKPAAPPAEDDKVLAAASEVAAPTSAVVEKEGEEDTMESAAAKKKKKKKEKEKEKKAAAVAAAASAPKEEVKPEASESKKSDSKTKAADKKVPKHVREMQEALARRKETEERKKREEEERLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLAGTGVVTLPTGDSGAPAKRPIYQTKKSKQTHNHQNGTAPVKAAEDVEANENLETPPDAESLEPEKVEVVESVLVEDKGTPEDVEEEEVEEDEEEWDAKSWDDVNLNGKSAFADEEADSEPETVVKKEIKNAAPPTVVKSTGTAKKAAPQPPTEKTESKKQVEKQLPNQDPQNATGPSQPSGENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKVCRNSPIVKALKQQTKDVQNEFNMRVTQVITQFKEQALNTELYYKNREMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMAQKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYIHHKEIKAAMGIKITAQGLEHAIAGTSLHVVEPDDDLESVKEAAMQDMNQVMSRIDKSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHRKDVMKASVMLEKKREFATILAFDVKVNQEAKDLAEELGVRIFMADIIYHLFDQFKAYIDTVKEEKKRETADEAVFPCVMKILPGCVFMKKDPIVLGVEILEGVLKVGTPICIPSRDYIDIGRIASIENNRKPVEDAKKGHSVAIKIVGTNSEEQQKMFGRHFEIDDELVSRISRRSIDVLKANYRDELTMDEWRLVAKLKTVFKIQ 1419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0157 1419 FunFam Eukaryotic translation initiation factor 5B 821 1049 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 489 506 - -
Acco01g0157 1419 Pfam Translation-initiation factor 2 1155 1268 IPR023115 -
Acco01g0157 1419 Coils Coil 557 624 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 722 741 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 229 250 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 116 144 - -
Acco01g0157 1419 Pfam Elongation factor Tu GTP binding domain 831 1039 IPR000795 GO:0003924|GO:0005525
Acco01g0157 1419 Gene3D Translation factors 1282 1419 - -
Acco01g0157 1419 PRINTS GTP-binding elongation factor signature 895 905 IPR000795 GO:0003924|GO:0005525
Acco01g0157 1419 PRINTS GTP-binding elongation factor signature 911 922 IPR000795 GO:0003924|GO:0005525
Acco01g0157 1419 PRINTS GTP-binding elongation factor signature 947 956 IPR000795 GO:0003924|GO:0005525
Acco01g0157 1419 PRINTS GTP-binding elongation factor signature 831 844 IPR000795 GO:0003924|GO:0005525
Acco01g0157 1419 CDD aeIF5B_II 1051 1160 - -
Acco01g0157 1419 CDD IF2_aeIF5B_IV 1290 1385 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 807 826 - -
Acco01g0157 1419 CDD IF2_eIF5B 830 1040 - -
Acco01g0157 1419 FunFam Eukaryotic translation initiation factor 5B 1169 1275 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 648 826 - -
Acco01g0157 1419 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1152 1281 IPR036925 -
Acco01g0157 1419 Pfam Elongation factor Tu domain 2 1066 1143 IPR004161 GO:0005525
Acco01g0157 1419 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 827 1045 IPR000795 GO:0003924|GO:0005525
Acco01g0157 1419 FunFam eukaryotic translation initiation factor 5B 1050 1169 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 331 352 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 531 636 - -
Acco01g0157 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 828 1118 IPR027417 -
Acco01g0157 1419 FunFam Eukaryotic translation initiation factor 5B 1282 1419 - -
Acco01g0157 1419 SUPERFAMILY Translation proteins 1286 1418 IPR009000 -
Acco01g0157 1419 Gene3D - 822 1049 IPR027417 -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 273 297 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 439 454 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 701 721 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 755 769 - -
Acco01g0157 1419 NCBIfam small GTP-binding protein domain 832 956 IPR005225 GO:0005525
Acco01g0157 1419 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 533 1415 IPR015760 -
Acco01g0157 1419 Gene3D Translation factors 1050 1170 - -
Acco01g0157 1419 Gene3D - 1171 1274 IPR036925 -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 1 636 - -
Acco01g0157 1419 MobiDBLite consensus disorder prediction 366 382 - -
Acco01g0157 1419 Coils Coil 491 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0157 Acco-ChrAcco01 1600572 1609390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0157 1 174 Eukaryotic Initiation Factors Gene Family AT1G76810 45.652 1.25e-07 54.7