Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0154 ATGGATCGAAGAAAAAAGAAGTACAAAATGATCAAACGTGAGAATAAAGACGACAAACATGCTGAAAATTCAATCATAGCTCTCTCTCCCCTTCCATTTATACCCCACCACCACGACGATCAGAACAAGGACAAAAATCACTCTCTCTCTCTCATTCACCCACCCAATCCACCAAATTTGGAAGAAAGAGAGAGTAAAGTACAGTTTCTTTCTTCCATTTCCATGGACCCCAAGTTCGTCGGAAAGCCGCCGATGACGGTGGACCTCGAGCAGATGCCTGACACCCCACAGCGTGGGTCCTACCACCGTAGGGCCCGCTCCGATACCTCCTTCCGCATCGCCAACTTCGATGAGCTCCTCCTTTTCGACCCATCCGACCTCGATATCTCCAACCTCCCTTCGCCGGCGTTGCCCAACTCCTCCACCGTCGGCAACAACGCCTCGCCTTTCACCGCCACCGCCGCAGCACAAAGCAGCGGCGGCGTGCCTGCAGCCTTGGATTTTGTCTCAAAGCCGCCGTCGGAGGAATCTAACGGCGTCGGCGGGAATTCACGGTCGAGGCCGGCGGGTTCCCCTGTCGGCCATATCCGGAGCTTGTCCATGGACTCTGATTTTTTCAGCGACCTGGGATTGACTGGTGGCGTTGATGGAGACAAATTTGGCGGGAAAGGTGCAGAGGAGAGAAGGGTGGGTCATCACCGGCACAGCAATTCCATGGATGGGTCATCGTCGATGTCTTTCGAGGCCGACTCTTCCATGGATATCGACGGCGTGAAGAAGGCCATGGCTCCCAATAAGCTCTCCGAACTTGCTCTGGTTGACCCCAAGAGAGCTAGGAGGATTCTTGCTAATAGGCAATCTGCTGCGCGATCAAAGGAGAGGAAAATTCGGTACACAAATGAACTGGAGAGGAAGGTACAAACGCTTCAATGTGAAGCAACTAACCTCTCAGCTCAGGTTACTATGCTTCAGAGAGACACTTCAGGGTTGACCACTGAGAATAAGGAGCTTAAACTGCGCTTAGAGGCTATGGAACAACAAGCGCAGCTTAGAGATGCGCTGAATGAAGCATTGAAGGAAGAACTGCAGCGGCTGAAGGTACAAAGTAGTCAGATAGCTGCCATGAATGGGAACCCTTCATATGGCGGGTTTCTTTCTCAATTTGCTTCCCAGTTAGCATTGCATCATCTTGCTAATCCTCAATCCCAGCAGCCTCAACAGCAATCACATGTCTCTCCCTCTGATCAGCCTTTCAACGGCCAGCCTGGCCCCGACTTCTTGGATTTCAATGGCAAGAACTAG 1302 0.5184 MDRRKKKYKMIKRENKDDKHAENSIIALSPLPFIPHHHDDQNKDKNHSLSLIHPPNPPNLEERESKVQFLSSISMDPKFVGKPPMTVDLEQMPDTPQRGSYHRRARSDTSFRIANFDELLLFDPSDLDISNLPSPALPNSSTVGNNASPFTATAAAQSSGGVPAALDFVSKPPSEESNGVGGNSRSRPAGSPVGHIRSLSMDSDFFSDLGLTGGVDGDKFGGKGAEERRVGHHRHSNSMDGSSSMSFEADSSMDIDGVKKAMAPNKLSELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQCEATNLSAQVTMLQRDTSGLTTENKELKLRLEAMEQQAQLRDALNEALKEELQRLKVQSSQIAAMNGNPSYGGFLSQFASQLALHHLANPQSQQPQQQSHVSPSDQPFNGQPGPDFLDFNGKN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0154 433 Gene3D - 274 335 - -
Acco01g0154 433 SMART brlzneu 272 336 IPR004827 GO:0003700|GO:0006355
Acco01g0154 433 MobiDBLite consensus disorder prediction 216 248 - -
Acco01g0154 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 274 337 IPR004827 GO:0003700|GO:0006355
Acco01g0154 433 FunFam Transcription factor VIP1 275 328 - -
Acco01g0154 433 MobiDBLite consensus disorder prediction 1 64 - -
Acco01g0154 433 SUPERFAMILY Leucine zipper domain 276 330 IPR046347 GO:0003700|GO:0006355
Acco01g0154 433 MobiDBLite consensus disorder prediction 163 196 - -
Acco01g0154 433 MobiDBLite consensus disorder prediction 396 419 - -
Acco01g0154 433 Coils Coil 299 375 - -
Acco01g0154 433 MobiDBLite consensus disorder prediction 220 236 - -
Acco01g0154 433 Pfam bZIP transcription factor 276 334 IPR004827 GO:0003700|GO:0006355
Acco01g0154 433 CDD bZIP_plant_RF2 277 326 IPR044759 GO:0003700|GO:0006355
Acco01g0154 433 MobiDBLite consensus disorder prediction 84 105 - -
Acco01g0154 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 57 414 - -
Acco01g0154 433 MobiDBLite consensus disorder prediction 396 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0154 Acco-ChrAcco01 1579037 1585325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0154 83 429 bZIP Transcription Factor Family AT1G43700 50.000 1.61e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco01g0154 bZIP_1 9.6e-07 CL0018