Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0131 ATGGAGCGAGTGATGTCAGGGTATGGCGGCAGCGCCGGAGAGTTGTCGGCTATGGTTTCGGTGCTGACGCATGTGGTGTCGTCAGGTTCTTCTGGACAGAACAGACACATTAATAATGAATGGCTACAAGGAATTAGCGGTTATCCAATTATGTCATCATCTCCTCGTTTGTCGCCTTCTTCGTCTTCGTCAGGTCCTTTCATGGCGTCTGCCTCTGGTTCATGGCTAGGTCAGAAAAGAGGGCGTCAAGAAGAAGAAGCCGCCTACAAAGCCGCTATTAATGACTTCACTGCACCATTATTACAGAACGAGTCATCTTCAGCAGTGACGGAGGCGGAAGATACGTCGGCAGTGGCTACCGCTGCGTTACCGGTGATGCCGTCGTCGGCTGAAACTGGTGGTTCGTATGAGGAAACAGGGGAGAGGAGGAGGAGATACAGAGGAGTGAGGCAGAGACCGTGGGGTAAGTGGGCGGCGGAGATTCGCGACCCTCACAAGGCAGCGAGGGTATGGCTTGGCACGTTCGACACGGCGGAGGCAGCCGCCAGAGCTTATGACGAAGCCGCATTGAGGTTCAGAGGTAGCAGAGCCAAACTAAACTTCCCAGAAAACGTCAGAGCAGTTTCAGCGCCAGTTCAAAATTTTCCGGTCACCAGCCACGTCTTTCAGCCGTCCTCTACGGCGGCGTTTCCGTTCATGCAGGCGTCTTCTTTTCAGGGGCCATCTGATATGGTCAGAGACTATTGGAATTACACCCAGCTGTTACAGAGCTCCGGCGACTTCCATGGTCAACAGCAGCCACAGCCGCCGCAACAGATACCGCCGAGTTTGATGCAGCAGTGGCTCCACAATTCTCAAATGGGTGCTCTTCAATCGTCGTCATCGTTATCGCCGGCATCATTGTCGTCTTCTTCGTCTACCATTGCATTTTCGCCCTCTAGTCAGTTATCCTCTGCTTCATTTCCCCTGCCTTCAGGTCAACAAATAGGCTATTTCCGACCACCAATGCGAAACCAAACTTCCGGCGAAGAAAACTCATATTTTCCGACGTCAACATGGTCAGAGACCGGTAACTTCCCTCCGCCGTCTAGTTGA 1095 0.5279 MERVMSGYGGSAGELSAMVSVLTHVVSSGSSGQNRHINNEWLQGISGYPIMSSSPRLSPSSSSSGPFMASASGSWLGQKRGRQEEEAAYKAAINDFTAPLLQNESSSAVTEAEDTSAVATAALPVMPSSAETGGSYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVSAPVQNFPVTSHVFQPSSTAAFPFMQASSFQGPSDMVRDYWNYTQLLQSSGDFHGQQQPQPPQQIPPSLMQQWLHNSQMGALQSSSSLSPASLSSSSSTIAFSPSSQLSSASFPLPSGQQIGYFRPPMRNQTSGEENSYFPTSTWSETGNFPPPSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0131 364 PRINTS Ethylene responsive element binding protein signature 146 157 IPR001471 GO:0003700|GO:0006355
Acco01g0131 364 PRINTS Ethylene responsive element binding protein signature 168 184 IPR001471 GO:0003700|GO:0006355
Acco01g0131 364 MobiDBLite consensus disorder prediction 53 71 - -
Acco01g0131 364 MobiDBLite consensus disorder prediction 53 76 - -
Acco01g0131 364 Gene3D AP2/ERF domain 144 204 IPR036955 GO:0003700|GO:0006355
Acco01g0131 364 CDD AP2 153 204 IPR001471 GO:0003700|GO:0006355
Acco01g0131 364 Pfam AP2 domain 145 194 IPR001471 GO:0003700|GO:0006355
Acco01g0131 364 SUPERFAMILY DNA-binding domain 145 203 IPR016177 GO:0003677
Acco01g0131 364 FunFam Ethylene-responsive transcription factor 2 144 203 - -
Acco01g0131 364 SMART rav1_2 145 208 IPR001471 GO:0003700|GO:0006355
Acco01g0131 364 MobiDBLite consensus disorder prediction 315 364 - -
Acco01g0131 364 ProSiteProfiles AP2/ERF domain profile. 145 202 IPR001471 GO:0003700|GO:0006355
Acco01g0131 364 PANTHER DNA-BINDING DOMAIN 110 291 IPR044808 GO:0003700|GO:0009873
Acco01g0131 364 MobiDBLite consensus disorder prediction 332 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0131 Acco-ChrAcco01 1366497 1367910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0131 105 220 AP2-EREBP Transcription Factor Family AT2G33710 54.167 1.20e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco01g0131 AP2 7e-15 CL0081