Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0128 ATGTCAAATGTGGATACTGATCGTGAATTTGCACTACCCGATACACATGTTGAAGAGTTGCCTCAATACATACATATAATGCAGAATGAATTTTTCAATAGAAGGCACGTGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATATGATGCTATTGACCCTGATAGTGCATGTGGGGATGGGTGTCTCAACGTATTGACCTACTCTGAATGCACACCTGGCTATTGCCCTTGTGGTGTCTTTTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTCAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCAGGCCAATTTATCATCGAATACTGTGGGGAAGTAATCTCATGGAAAGAAGCCAAGCGAAGAGCCCAGGCTTATGAAACTCAAGGTCTTAAGGATGCTTTCATTATTTGTCTTAATGCCTCTGAATCCATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAACCATTCATGTCAGCCAAATTGTGAGACAAGGAAATGGAATGTCTTGGGTGAGATAAGAGTTGGAATATTTGCAAAACAAGATATACATGTTGGAGCTGAACTGGCATATGATTATAATTTTGAATGGTTTGGTGGTGCAAAGATTCGTTGCCTCTGTGGTGCAGCCAAATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAAGATACATATTTATGGGAAGATGATGATGAAAGGTACACTGTTGAGAAAATTCCAGTATATGACTCTGCAGAGGATGAACCTCCCTCAAAGGTCCTTAGAAATTTACATTCTGACATTCCTGGTAATGGTGTGCAAGTTAATGGGAAAACGGAACACTCCAGGGACGTTATCATAAAACCTGAACAACCATCAGAGTCGATTGCTTTTGGGATTCAACTGCTTGGATCAGTTCCAGAAAATGGTTTGCATGTCAATTCAATAAAATCTGGAATGGAAAGTGATGATATGAAGGCCTTTCCACAAAACAATGCAATGATATCACGAATCAGAAATACTGCGGCCCGAAACTATCGCATTGGACCTAGGTCCATACCTGCCAAAAAATCAAAGAAATATAATGAAAGGTTCAAAAATATCGCACAGAAGCAAGTTGATGTGAAGTCTGCTGCTGAATCTTTAGCATCAAAAGAAGCACAAGAGGAGATTTTAAGATATGAGGAAATGAAGAATGAGGCGACTTGTGGTCTTGATAACTTGTACAATGAAATTCGACCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCGACGAGTGTAGCAGAGAAGTGGATTGAAGCTAGCTGTTTGAAATTGAAGGCAGAGTTTGACCTTTACTCTTCCATTGTCAAAAATTTTGCCTGCACTCCTCTCAAGCCTCGTGGCCTTCCAAAATCTTCTCCTTCTCCTTCTCCTCCTCAAATTGATCATGAAAATAACTTGTTGACGAATTGA 1509 0.4016 MSNVDTDREFALPDTHVEELPQYIHIMQNEFFNRRHVKQKEEDIAICECKYDAIDPDSACGDGCLNVLTYSECTPGYCPCGVFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRAQAYETQGLKDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIHVGAELAYDYNFEWFGGAKIRCLCGAAKCSGFLGAKSRGFQEDTYLWEDDDERYTVEKIPVYDSAEDEPPSKVLRNLHSDIPGNGVQVNGKTEHSRDVIIKPEQPSESIAFGIQLLGSVPENGLHVNSIKSGMESDDMKAFPQNNAMISRIRNTAARNYRIGPRSIPAKKSKKYNERFKNIAQKQVDVKSAAESLASKEAQEEILRYEEMKNEATCGLDNLYNEIRPAIEEHERDSQDSVSTSVAEKWIEASCLKLKAEFDLYSSIVKNFACTPLKPRGLPKSSPSPSPPQIDHENNLLTN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0128 502 PANTHER SET DOMAIN PROTEINS 16 454 - -
Acco01g0128 502 Pfam SET domain 106 212 IPR001214 GO:0005515
Acco01g0128 502 SMART PostSET_3 219 235 IPR003616 -
Acco01g0128 502 Gene3D SET domain 2 249 IPR046341 -
Acco01g0128 502 SMART shorttest3 42 94 IPR006560 GO:0005634|GO:0042054
Acco01g0128 502 SUPERFAMILY SET domain 22 232 IPR046341 -
Acco01g0128 502 MobiDBLite consensus disorder prediction 478 502 - -
Acco01g0128 502 SMART set_7 95 218 IPR001214 GO:0005515
Acco01g0128 502 Pfam AWS domain 55 92 IPR006560 GO:0005634|GO:0042054
Acco01g0128 502 ProSiteProfiles SET domain profile. 95 212 IPR001214 GO:0005515
Acco01g0128 502 ProSiteProfiles AWS domain profile. 42 93 IPR006560 GO:0005634|GO:0042054
Acco01g0128 502 ProSiteProfiles Post-SET domain profile. 219 235 IPR003616 -
Acco01g0128 502 FunFam Histone-lysine N-methyltransferase 10 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0128 Acco-ChrAcco01 1345049 1349728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0128 77 234 C2H2 Transcription Factor Family AT2G23740 33.708 1.63e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco01g0128 SET 2.1e-18 No_clan