Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0115 ATGTGGACGCCGACGCCGACGGCACTGTCGTCACCGGCGACACCGGGGACTCCGGCGCCGCTGTTCACGTCGATGGATGTGGACTCTCTGTCGTACCAGAGGTGTAAGTGTTCGCCAACGAAGGGCCACACCTGCTTCACTGATCTCTCTGTCCCCACTCCAACCGTGTCCCTCACCCGCAAGATCGGAGCAGAGTTCGTGGGCACCTTCTTACTGATATTCGTGGCATCGGCGGGACCCATCGTCAACCAGAAATACAACGGAGCAGAGAGCTTGCTGGGCAACGCAGCATGTTCCGGCTTAGGTGTGATGATCGTGATCTTGTCCACCGGCCACATCTCCGGCGCTCACCTCAACCCTTCCGTCAGCATTGCCTTCGCCAGCTTCCGCCACTTCCCGTGGATCCACGTCCCTGCCTACATCGCCACTCAGATCTCCGCCTCCATCTGCGCCTCCTTCGCCCTCAAGGCCGTCTTCCATCCCTTCATGTCCGGTGGCGTTACCATTCCTTCAGAGACTACCAGCGTCGTCCAGGCTTTCGCGCTTGAGTTCATAGTCACTTTCTTTCTGCTCTTCGTCGTCACTGCCGTTGCCACTGATACTCGTGCTGTTGGGGAATTGGCTGGGATTGTGGGATTGCTGTCGGGGCCACAGTTTTGCTCAACAGTCTCATTGCTGGGTAAGAACCTTCTTCCTACTTTTCTTTGA 708 0.5749 MWTPTPTALSSPATPGTPAPLFTSMDVDSLSYQRCKCSPTKGHTCFTDLSVPTPTVSLTRKIGAEFVGTFLLIFVASAGPIVNQKYNGAESLLGNAACSGLGVMIVILSTGHISGAHLNPSVSIAFASFRHFPWIHVPAYIATQISASICASFALKAVFHPFMSGGVTIPSETTSVVQAFALEFIVTFFLLFVVTAVATDTRAVGELAGIVGLLSGPQFCSTVSLLGKNLLPTFL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0115 235 SUPERFAMILY Aquaporin-like 58 210 IPR023271 -
Acco01g0115 235 Gene3D Glycerol uptake facilitator protein. 45 219 IPR023271 -
Acco01g0115 235 PRINTS Major intrinsic protein family signature 136 155 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0115 235 PRINTS Major intrinsic protein family signature 99 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0115 235 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0115 235 PRINTS Major intrinsic protein family signature 60 79 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0115 235 Pfam Major intrinsic protein 55 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0115 235 ProSitePatterns MIP family signature. 117 125 IPR022357 -
Acco01g0115 235 PANTHER AQUAPORIN NIP2-1 43 211 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0115 Acco-ChrAcco01 1222484 1225399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0115 21 210 Major Intrinsic Protein MIP AT4G10380 74.257 2.93e-100 292