Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0114 ATGGCGGGATCGGAAACAGGGACGCCGACGGCGGCGTCGGCACCGGCAACGCCGGGGACTCCGGCGCCGCTTTTCACGTCGCTGCATGTGGACTCTGTGTCATACGAGAGGAACTCCATGCCGAGGTGTAAGTGTTTGCCAACGAAGGGCCACACCTGCTTCACCGATCTCTCTGTCCCCACTCCTGACGTGTCCCTCACGCGCAAGATCGGAGCAGAGTTCGTAGGCACGTTCTTACTGATGTTCGCGGCATCGGCGGGGCCCATCCTGAACCAGAAATACAACGGAGCAGAGAGCCTGCTGGGCAATGCAGCTTGTGCCGGCTTAGCCGTGATGATCATCATCTTGTCCACCGGCCACATTTCCGGCGCCCACCTCAACCCTTCCCTCACCATCGCCTTCGCCACCTTCCGCCACTTCCCGTGGGTCCACGTCCCCGCCTACATTGCCGCTCAGGTCTCCGCCTCCATCTGCGCCTCCTTCGCCCTCAAGGCCATCTTCCATCCCTACATGTCCGGCGGCGTCACCATTCCTTCAGAGACTACCACCGTTGGCCAGGCTTTTGCGCTTGAGTTCATAATCACTTTCAATCTCCTCTTCGTCGTCACTGCTGTTGCCACTGATACTCGTGCTGTTGGGGAATTGGCTGGAATTGCTGTCGGAGCCACAGTTTTGCTCAACATTCTCATTTCTGGGCCGGCAAGTGGCGGTTCAATGAACCCGGTTCGCACATTGGGTCCAGCCGTGGCAGCAAGAAATTACATGCACGTATGGATATATCTGATTGCGCCCACCCTCGGAGCTCTGGCCGGTGCCGGTGTTTATACTCTCGTCAAGCTCCGCGACCACGAGGCTGAGCCACCCCGCCAGGTTCGGAGCTTCCGTCGCTAG 891 0.5926 MAGSETGTPTAASAPATPGTPAPLFTSLHVDSVSYERNSMPRCKCLPTKGHTCFTDLSVPTPDVSLTRKIGAEFVGTFLLMFAASAGPILNQKYNGAESLLGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFATFRHFPWVHVPAYIAAQVSASICASFALKAIFHPYMSGGVTIPSETTTVGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAARNYMHVWIYLIAPTLGALAGAGVYTLVKLRDHEAEPPRQVRSFRR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0114 296 Pfam Major intrinsic protein 64 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 MobiDBLite consensus disorder prediction 1 15 - -
Acco01g0114 296 MobiDBLite consensus disorder prediction 1 20 - -
Acco01g0114 296 SUPERFAMILY Aquaporin-like 64 289 IPR023271 -
Acco01g0114 296 FunFam Aquaporin NIP2-1 56 290 - -
Acco01g0114 296 Gene3D Glycerol uptake facilitator protein. 58 291 IPR023271 -
Acco01g0114 296 PANTHER AQUAPORIN NIP2-1 52 284 IPR034294 -
Acco01g0114 296 CDD MIP 68 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 PRINTS Major intrinsic protein family signature 144 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 PRINTS Major intrinsic protein family signature 107 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 PRINTS Major intrinsic protein family signature 190 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 PRINTS Major intrinsic protein family signature 68 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco01g0114 296 ProSitePatterns MIP family signature. 125 133 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0114 Acco-ChrAcco01 1205985 1209907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0114 24 296 Major Intrinsic Protein MIP AT4G10380 76.071 1.79e-152 427