Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0104 ATGGATATCAGTAATGGTTCTATATCAAGAGAGCATCGCAAGACTCATGATTCATTATCTATTTCTCCATCACAAACTTCTCCAAAGTCACCCAAACCCTCTGGCTCTCCAAGGTCCCCTAGGTTCCAAGTCAAGCAACCACAATCTCCAAGAGATGGATGTCCCAAAAAAGAAAGTGCAGATTCTTTCCCTGTTACTTCATTGAAAACTTCTCCAAAGTCACCAGCATCCCCCACTTCTCCAAGGTCTCCAAAGTCCCCTAGGTTGCCTGGCCATAGTACAAAGAATGAAAGGCAATCGCGTTCGCCAAGAGATGGACGACCAAAGAAAGGAGGTTGCGGAGGGAAAGGCACGTGGGGAGGATTGCTTGATACGGAAGACACGGACTTTCTTGACCCTCATGATCCGAATTATGACAGCACTGAGGAAAAAGAACCTCCAATTGAAAACAAAAGGAAAGGGGAGTTAAATGAGTACAAGAGGAAAGCTACAATAATAGTGGTGGAATATTTTACCACTGATGATATTGTTGCTGTGAAAAATGAACTGAAGTTACTTGGCGCACCGTACTTCAGCTACTATTTTGTCAAAAAGCTTGTCTCAGTGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTTTGCTATCTGCACTATATGCAGACATAATTGATCCTTCTCAAGTTTACAAGGGCTTCAGCAAACTAGTTGAATCTGCGGATGACCTGATTGTAGACATACCTGACGCGGTTGATGTTCTAGCGCTTTTCTTGGCTCGAGCCGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAGACAGATGGCTTACTTACCGAAGGACTCAAAAGGGGTTGAGGTCTTGAGAAAGGCGGAGAAAAACTACCTCTCAGCCCCTCTACATGCTGAAATTATAGAGCGCCGGTGGGGAGGAAGTAAGAACGTGACAGTTGATGATGTCAAGGCTGGAATAAACAATTTGTTGGTAGAATATGTAACAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTCTATCACCATGAGATAGTGAAAAGGGCTCTAATAATGGCAATGGAGAGGCGCCAAGCAGAAGGTCCTCTACTAGATCTCTTGAAAGAAGCAGCTGAAGAAGGCTTCATCAACTCCAGCCAAACCTCAAAGGGCTTTAATCGGTTGATTGACACGGCTGATGACTTATCACTCGACATACCAAACGCGCGTGAAATACTCCAAAATCTAATGTCCAAGGCAGCATCTGAGGGTTGGTTATGTGTTTCATCTTTAAAATCACTCTCACTGGAGCCAAAAAAAGAGTCACTGGAAGAAAGTGCAGCCAGAAATTTCAAGGTAAAGGCTCAATCCATTATTCAAGAGTACTTCTTGTCAGGTGACATATTTGAAGTTATTAGTTGTCTTGAGCAAGAGAACAAAACTTGCTCTCCACACCTCAATGCAATATTTGTCAAGAGGCTTATAACCTTAGCCATGGACCGAAAGAAGCGCGAGAAGGAAATGGCTTCGGTTCTGCTTTCATCTCTGTGTTTCCCAGCTGATGATGTAGTGAATGGTTTTGTCATGTTGATAGAATCAGCAGATGACACTGCCCTGGACAATCCAGTGGTAGCGGAGGATCTTGCCATGTTCCTGGCCAGAGCAATAGTGGATGAAGTCCTGGCCCCACAACATCTGGAAGAGATTGGAACACAATGTGTGGGACCAGATTCAATAGGAAGTAAAGTGCTTCAAATGGCAAAGTCATTGCTCAAAGCTAGGCTTTCAGGGGAGAGAATATTAAGATGTTGGGGTGGAGGAGGAAGCAGCAAAAGTGGGTGGGAAATTGAGGATGTTAAGGACAAGATTGTAAATCTCTTGGAGGAGTATGAATCCGGGGGCGAAATAAGGGAGGCGTGTCAGTGCATGAAAGAACTTGGTATGCCATTTTTCCACCATGAGGTTGTGAAGAAAGCTCTGGTGAAAATTATTGAGAAGAAGAATGATAGGTTGTGGGGTCTACTCAAGGAATGTTTTGAATCTGGACTGATAACTATGAACCAGATGATGAAGGGGTTTGGAAGGCTTGCAGAATCTCTTGATGACTTGGCTTTGGATGTTCCTGATGCTAAGAAACAGTTTATACACTATGTAGAACTAGCAAAGAGTTCAGAATGGTTGGATTCTTCATTTAGTCTCAGCAAATTTGAACATTCCACAGGAAATGGAACCTGCTAA 2259 0.432 MDISNGSISREHRKTHDSLSISPSQTSPKSPKPSGSPRSPRFQVKQPQSPRDGCPKKESADSFPVTSLKTSPKSPASPTSPRSPKSPRLPGHSTKNERQSRSPRDGRPKKGGCGGKGTWGGLLDTEDTDFLDPHDPNYDSTEEKEPPIENKRKGELNEYKRKATIIVVEYFTTDDIVAVKNELKLLGAPYFSYYFVKKLVSVSMDRHDKEKEMAAVLLSALYADIIDPSQVYKGFSKLVESADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKRQMAYLPKDSKGVEVLRKAEKNYLSAPLHAEIIERRWGGSKNVTVDDVKAGINNLLVEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERRQAEGPLLDLLKEAAEEGFINSSQTSKGFNRLIDTADDLSLDIPNAREILQNLMSKAASEGWLCVSSLKSLSLEPKKESLEESAARNFKVKAQSIIQEYFLSGDIFEVISCLEQENKTCSPHLNAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVAEDLAMFLARAIVDEVLAPQHLEEIGTQCVGPDSIGSKVLQMAKSLLKARLSGERILRCWGGGGSSKSGWEIEDVKDKIVNLLEEYESGGEIREACQCMKELGMPFFHHEVVKKALVKIIEKKNDRLWGLLKECFESGLITMNQMMKGFGRLAESLDDLALDVPDAKKQFIHYVELAKSSEWLDSSFSLSKFEHSTGNGTC 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0104 752 MobiDBLite consensus disorder prediction 127 154 - -
Acco01g0104 752 Pfam MA3 domain 627 735 IPR003891 -
Acco01g0104 752 Pfam MA3 domain 459 568 IPR003891 -
Acco01g0104 752 Pfam MA3 domain 160 270 IPR003891 -
Acco01g0104 752 Pfam MA3 domain 326 433 IPR003891 -
Acco01g0104 752 MobiDBLite consensus disorder prediction 91 111 - -
Acco01g0104 752 Gene3D - 309 441 - -
Acco01g0104 752 Gene3D - 609 741 - -
Acco01g0104 752 SUPERFAMILY ARM repeat 319 439 IPR016024 -
Acco01g0104 752 SUPERFAMILY ARM repeat 455 616 IPR016024 -
Acco01g0104 752 FunFam programmed cell death protein 4 447 602 - -
Acco01g0104 752 ProSiteProfiles MI domain profile. 158 279 IPR003891 -
Acco01g0104 752 ProSiteProfiles MI domain profile. 457 578 IPR003891 -
Acco01g0104 752 MobiDBLite consensus disorder prediction 19 46 - -
Acco01g0104 752 MobiDBLite consensus disorder prediction 1 154 - -
Acco01g0104 752 SUPERFAMILY ARM repeat 157 316 IPR016024 -
Acco01g0104 752 FunFam programmed cell death protein 4 149 301 - -
Acco01g0104 752 Gene3D - 149 299 - -
Acco01g0104 752 Gene3D - 444 601 - -
Acco01g0104 752 ProSiteProfiles MI domain profile. 625 744 IPR003891 -
Acco01g0104 752 PANTHER PROGRAMMED CELL DEATH 4 67 738 IPR039778 GO:0045892
Acco01g0104 752 MobiDBLite consensus disorder prediction 1 18 - -
Acco01g0104 752 SMART ma3_7 626 735 IPR003891 -
Acco01g0104 752 SMART ma3_7 458 569 IPR003891 -
Acco01g0104 752 SMART ma3_7 159 270 IPR003891 -
Acco01g0104 752 SMART ma3_7 323 434 IPR003891 -
Acco01g0104 752 SUPERFAMILY ARM repeat 621 739 IPR016024 -
Acco01g0104 752 ProSiteProfiles MI domain profile. 322 443 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0104 Acco-ChrAcco01 1105868 1108707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0104 403 577 Eukaryotic Initiation Factors Gene Family AT3G60240 25.414 6.87e-10 60.8