Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0098 ATGGGTTTGGCATCAGACTCCGAGTGTTTCAGCAAAATGATGGCTTCGATGCCTGGGTTTCGTTTCCACCCTACGGACGAGGAACTGGTCATGTATTATCTGAAGAGGAAGATGTCTGGGAGGAAGCTGAAGCTCGGCGTGATCCGGGAGACTGACGTCTGCAAGTGGGATCCTGAGGAATTGCCTGCGCAATCTGGGCAAAAAACTGGAGATAGACAATGGTTTTACTTCAGTCCTAGAGATAGGAGGTACCCTAATGCTGCAAGGTCAAGCAGAGCAACAAGACATGGCTACTGGAAAGCTACAGGAAAAGATCGTAATGTGACTTATGCGTCCCGAACTGTTGGAGTTAAGAAGACACTGGTTTTCTACAAAGGCAGAGCTCCTAATGGTGAGCGCACTGATTGGGTTATGCATGAGTACACGTTGGATGAACAAGAGCTTCAAAGATGCCAAGACATTAAGGACTATTTTGCACTCTACAAGCTTTACAAGAAAAGTGGTCCTGGTCCTAAAAACGGTGAGCAGTATGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGATGATGATTTTGCAGATTGCTATGCAAAGTCAGCTGACTGTGAAGTTCCAACACAGCAACATGATGTTGTTCCTTGTGCTGATACTTTCAATGTGAATGGTCCCGAGCAGCCATTGCTCGATGATGAAATTGAGGAGATCATGAAGAAACTCATGGATGACGAGTCTCTCCTTGAACAGCAAAATGTGAACAATAATTCTGCCTTACCTCTGATATGTGAGGAAATGCAGAACGGTGCAGTTGATCAATTCTATAGGGAAGTCATGTTTCCTGAGCCACTTGAAATGTCTCACTCAAGTGGTGTTCAGCAATGTGGAGTGGGTCCCAGTTCTGACTTCCCTCAGTCAGCTATTTCTCACCTGCAAATGTCTGAAGCTCCCGGGATTACTTCTACTCCCAACACTAAAGGAGCTGAAACTGGCTTATCTGTGGATGACTTCTTGGAGTTGGATGATCTCATTGGTCCTGAACATGCATTGCCAAACTTCGATAAGCCTGTGGAGTACCTGCAGTTTGAAGATGGATTGAGTGAACTTGATCTGTACCTTGATGCTCAGATGTTTCTTCATGACATGGAGCTGGTTTCACATCCATATATGAACACAATGGATATTGCTACTGTAGATCAAAATTATGAGCTGCTATCGAATCAAGAAAATGCAAATCAAGTTGGTGAAGTCGTGATGCATGCTCAAAGAAACATCCTGCATTCAGCAGAACACATCAATGTTTCGATGTCTCTACCAACATCAGGTATATATTATGAGTCTGCTAGCTTTCATACTGAAAGCAATGGAACTGAAGAAAGCACTGTGGGAGGTGTTGCTGCAAGTAAATTATCTTCTTCTCTCTGGAACTTTGTTGAGTCAATACCAACTACTCCTGCATCAGCATCTGAAAATGCTTTGGTAAATCGGGCCTTTGAGCGGTTGTCTAGCTTGAATAGGTTGAATATCGGCGTCAAGGACACAAACGTTGCTGCAGGTAATGACACTGCAACTATGAAGAGAGCAGGCAAAAAAGGGGTTATCTTCCTTTTCTTTCCAGTTCTTGTTGCCTTGTGTGCTTTCTTATGGGTTTCTTTGGGAACTTTAAGACTATTAGGTGTACCTAACTGA 1683 0.4379 MGLASDSECFSKMMASMPGFRFHPTDEELVMYYLKRKMSGRKLKLGVIRETDVCKWDPEELPAQSGQKTGDRQWFYFSPRDRRYPNAARSSRATRHGYWKATGKDRNVTYASRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEQELQRCQDIKDYFALYKLYKKSGPGPKNGEQYGAPFNEEEWADDDDFADCYAKSADCEVPTQQHDVVPCADTFNVNGPEQPLLDDEIEEIMKKLMDDESLLEQQNVNNNSALPLICEEMQNGAVDQFYREVMFPEPLEMSHSSGVQQCGVGPSSDFPQSAISHLQMSEAPGITSTPNTKGAETGLSVDDFLELDDLIGPEHALPNFDKPVEYLQFEDGLSELDLYLDAQMFLHDMELVSHPYMNTMDIATVDQNYELLSNQENANQVGEVVMHAQRNILHSAEHINVSMSLPTSGIYYESASFHTESNGTEESTVGGVAASKLSSSLWNFVESIPTTPASASENALVNRAFERLSSLNRLNIGVKDTNVAAGNDTATMKRAGKKGVIFLFFPVLVALCAFLWVSLGTLRLLGVPN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0098 560 Gene3D NAC domain 25 168 IPR036093 GO:0003677|GO:0006355
Acco01g0098 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 248 - -
Acco01g0098 560 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Acco01g0098 560 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Acco01g0098 560 FunFam NAC domain-containing protein 100-like 25 170 - -
Acco01g0098 560 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0098 Acco-ChrAcco01 1070356 1073271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0098 1 557 NAC Transcription Factor Family AT1G34190 40.504 4.99e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g0098 NAM 1.3e-35 No_clan