LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco01g0090	ATGGAGCTTTATATCGTGCTCTCGTCTATTACAGTCTCTTTAGTCATATACTTGCTTTTCTCGAGTCGCCGACGTTGCAAGAACCGGCCGCCAGCTCCGGCAGCCCTCCCCATTATTGGCAACCTCCTTCAGGTCGGCCCTAAACCTCACCAGTCTCTCTCTGCCTTAGCCAAAACCTATGGCCCCCTCCTCTCCCTCCAGCTCGGCTCCGTCACGGTGGTCGTGGCTTCCTCTGATGCCGTGGCCAAGGAAATCTTCCAAAAGAACGACCAGTCCTTCCCCAACCGCCCGATCCTCGAGTCTGTAGCCGCCCAGCCCAACATCAACGACACGCTCGCCTGGGCTCCTGCCGACCACAGATGGCGCAACCGCCGCCGCATCTGCACCACCCAGATATTCACCACTCAACGACTCGACCTCCTTCAAGACTTGCGCCACCGTAACGTCCACCAACTCATCAAACACATCCAGAAACAGTCCGCCTCAGGAACTCAGGTGGACATCGGTGAGCTTGCATTCGCCACCATGTTAAACTTGGTTTCAAACACAGTGTTCTCGGTGGATCTGGTGGATCCAGAGTTCGAGACGGCCGGGGAATTCAAGGAGCTTGTGTGGAGGATCATGGAGGACGCCGGGAAGCTGAACCTCGCCGACTATTTTCCGGCATTGAAGAGGTTTGACTTGCAGGGCGTGAGACGCCATGTGAGGGTTTCCTACGAGAGGTTGCACGAAATATTCGATGACCTAATCCAGAAACGTTTGAAGCAAAGAGAGGATTCAAGTTCTCCAAAGGGCGATTTTCTGGATGTTTTGCTTGATCATTGCCACCAAGAAAACGGATCAGATTTCACTGGTGAAAGCATCAAGCCATTAATCCTGGATTTATTCATTGCTGGGAGCGATACTTCAGGATCAACCACCGAGTGGGCAATGGCAGAACTTATTAGAAACCCAGAAATAATGCGAAAAGCCAAAACAGAACTGAACCAAGTCATAGGAAGCAACAACATCGGAGAAATCAAAGAATCAGACATCCCTCGTCTTCCCTACATCCAAGCAATAGTTAAAGAAACCCTAAGGCTTCACCCTCCAGTGCCTCTTTTACTGCCTTACGTTGCAGCAAACGACGTCGTTGTGAGTGGCTACACCATCCAGAAAGGAGACCAAGTCTTGATAAACGCATGGTCCATTAGCAGAAACCCATCATATTGGGATAATCCGACGTCGTTTTTGCCAGAGAGGTTTCTTACTGAGTCTGCCCCAGATTTTAAGGGCAGGGACTTTGAGTACTTGCCATTTGGTGCTGGAAGAAGGATATGCCCAGGTTTGCCACTGGCTAATAGGATGATTAGCTTGATGGTGGCGACTTTGGTGCATTCTTTTGAGTGGGACCTACCAAAGGGTATGACTCGTGAAACCGTGGACATGAACGAACAGCATGGAATCACTTTGAAGAAGGCTGTCCCTCTTTGTCTTGTTCCAAGATCTATATGA	1494	0.5033	MELYIVLSSITVSLVIYLLFSSRRRCKNRPPAPAALPIIGNLLQVGPKPHQSLSALAKTYGPLLSLQLGSVTVVVASSDAVAKEIFQKNDQSFPNRPILESVAAQPNINDTLAWAPADHRWRNRRRICTTQIFTTQRLDLLQDLRHRNVHQLIKHIQKQSASGTQVDIGELAFATMLNLVSNTVFSVDLVDPEFETAGEFKELVWRIMEDAGKLNLADYFPALKRFDLQGVRRHVRVSYERLHEIFDDLIQKRLKQREDSSSPKGDFLDVLLDHCHQENGSDFTGESIKPLILDLFIAGSDTSGSTTEWAMAELIRNPEIMRKAKTELNQVIGSNNIGEIKESDIPRLPYIQAIVKETLRLHPPVPLLLPYVAANDVVVSGYTIQKGDQVLINAWSISRNPSYWDNPTSFLPERFLTESAPDFKGRDFEYLPFGAGRRICPGLPLANRMISLMVATLVHSFEWDLPKGMTRETVDMNEQHGITLKKAVPLCLVPRSI	497

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco01g0090	497	FunFam	Cytochrome P450 76C4	21	493	-	-
	Acco01g0090	497	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	433	442	IPR017972	GO:0005506\|GO:0016705
	Acco01g0090	497	PRINTS	E-class P450 group I signature	393	417	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Acco01g0090	497	PRINTS	E-class P450 group I signature	440	463	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Acco01g0090	497	PRINTS	E-class P450 group I signature	57	76	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Acco01g0090	497	PRINTS	E-class P450 group I signature	81	102	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Acco01g0090	497	PRINTS	E-class P450 group I signature	430	440	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Acco01g0090	497	PRINTS	E-class P450 group I signature	287	304	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Acco01g0090	497	PRINTS	E-class P450 group I signature	352	370	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Acco01g0090	497	PRINTS	E-class P450 group I signature	307	333	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco01g0090	Acco-ChrAcco01	999252	1002684	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco01g0090	3	494	Cytochrome P450	AT2G45550	42.200	1.90e-139	409

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