Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0059 ATGGGTGGGTACGGGTACATATCGTCTTTTTTCTTCGTTTCTCTGTGCTTTTCGTTCTGCCCAATGGTGTTGTGTAAGCTATCCCAGAACCAAACCAACACCATGATCTCACTCTCCCACCTTCTTAATGGAATCGGCTTAACTGATTGGAACATGGACAAAAACCCAAATCCATGTCATTGGAAGGGAGTTGCTTGCGATCAGACCAATTCCTCCGTCATCAAATTTCTTCTATCTGGACATTCCATCCCTTCCTCCAACTTTCTGACTCTTCTCTGCCAAATTGAAAGCTTGCAGCATCTTGATCTTTCTGGTAACATCATTAGCTCAATTCCAGACAATTTCATCACTGATTGTGGAAAGGTTGAGGGGTTGAAGTTGCTCAATTTCAGTTATAACAACATAAGGGGTCCCTTGCCTACTTTTCGTGGATTTCATGTGCTAGAATCCCTGGATATGTCTTTCAATAACTTTTCTGGAAAAGTTGATTCTGAGTTAGCTGGATTAGCCAGCCTCAAGAGCTTAATTCTTAGTTTCAATTCTTTCAATGGGCCCCTTCCTACCAAACTTGGAAATCCCGCCAATTTGGAGCAGCTTGGGCTAAGTAATAATCATTTTGTAGGAACAATCCCCGCTGAAATCCTGAGTTACACAAATTTGACTTTGCTTGATCTTAGAGGAAATAATATTTCAGGGCCTATTCCTAGCAACATAGGAGATCTGTCCAGATTGGAAACTTTGATTCTGTCCTCTAATCAGCTCGGAGGGGAAGTCCCAAGTGCACTCTCGAACATCAAAACCCTCGTCCGTTTTGCGGCCAATGAAAACGGATTTTTTGGTTCTGTTCCCAGCGGAATTACAAGATTTCTCAAAAACTTGGATCTTAGTTATAATAAGTTGTACGGGCCTATTCCAGAAGGCCTTCTTTCACAATCAAATCTGGTGTCTGTGGATTTGTCCTATAACTCGTTATCTGGGCCTTTACCAGCAGACATATCTTCTAGCATTGTCAGGTTGAGATTAGGGGGGAATTCTCTGAATGGGACAATATCTTCCAAAGCATTTGCAACAGGTCAGAAATTGATGTATATCGAACTCGAAGCCAATCACCTGACGGGCCAAATACCTCCTGAGGTGGGTTCTTGCCAGAACTTGGCCTTGTTGAACCTGGCTCAGAATCAACTATCTGGTGGATTGCCTGCAGAGCTTGGCAAGCTTAACAATCTTCAAGTGTTGCAGCTTCAAGGGAATAAGCTTTCTGGACAAATACCAGCTCAAGTGTCTCAACTACAGAAGCTGTTGACGCTGAATTTGAGCTACAATTCTCTGGATGGAGCCATTCCGCCAGCAATGTTCAATTTGGTAACGCTTAGTAAGATTTACTTACAGCAAAACAATCTCAGTGGTTCTATTCCCACATCTATAACGGTCATGGAATCCCTTATTGAACTTCAACTTGGAGAAAACCAGCTAAGTGGTTTGATTCCAAAAATGCCATTGAGTCTTCAGATTGCCTTGAATCTCAGCAGAAATCTCTTTGAGGGGCCCATTCCTAGCACTCTTGATGGGTTGAATAACCTGGAAATCTTGGATCTCTCAAATAACAAATTTGATGGTAAAATTCCCGATTTTCTCACTAGAATGCCGGCTTTGACACAGTTGGAACTTTCTAATAATTCACTGTATGGTGTCATTCCCAACTTTAATCCTCATGTTAAAGTTGATTTGGCTGGAAATAATGGTGTCGTAAACAAAACTGCAACTTCCAACACTTCAAGATCTCCAAAGGGAAGTCATGTTGTCATGGCAGTTCTTGTTTCAATTGCAGCTGCAGTTTTTCTGGTTGGCCTGGTCACTGTGCTGGCTGTATTAATCTCCCGACACTTATACAGGGTAAATGACGAACAATTGCAGCCATATGAAGACCCTCAACCCCCTCAGGTCATCCAAGGTAACTTATTAACTCCCAACGGAATTCACAGATCCAACATTGATTTCTCTAAGGCCATGAAAGATGTTGCTGAAACATCAAATGTTACTGTGAAAACAAGGTTTTCAACTTACTACAAGACTATTATGCCATCTGGATCAATCTACTTCGTCAAGAAGCTTAACTGGAGTGAGAAGCTATTCCCACTGGGCAGCCATGATAAATTTGGTAAAGAGCTAGAGGTCTTGGCAAAATTGAACAATTCAAATGTCATGACGCCTTTGGCTTATGTTCTGTCCACTGACAGCGCTTACATACTGTATGAATTTATCTCAAATGGCTCCCTTTATGATGCTCTTCATGGAAGCTTGCGAAAGTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGCGGCTCAAGGTCTCTCTTTTCTGCATGGATTTACCTCAGGTCCAATTCTTCTCCTTGACCTATCAAGTAAAAGTATAATGCTGAAGTCCCTCAAGGAGCCTCTAGTTGGAGATATTGAACTCTACAAAGTGATTGATCCTTCAAAGAGTACAGGAAGTTTTTCTGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTGACAATGGCGGGGAATGTGTACAGTTTTGGGGTGATCCTGCTTGAATTGTTAACGGGAAAGCCAGCAGTGACTGATGGGACTGAATTGGTGAAGTGGGTGATGCGCAACTCGGTGAAGCAAGAACACATTCTGGATTTTAGTGTCAGTAAAACATCTCAGGCTGTCAAAACCCAGATGCTTGCCATTCTTCAGGTAGCTCTTGCCTGTGTCAGTTCATCCCCTGAAGCAAGACCAAAGATGAAGAGTGTGCTCCGGATGCTCCTGAATGCACGATAA 2844 0.4248 MGGYGYISSFFFVSLCFSFCPMVLCKLSQNQTNTMISLSHLLNGIGLTDWNMDKNPNPCHWKGVACDQTNSSVIKFLLSGHSIPSSNFLTLLCQIESLQHLDLSGNIISSIPDNFITDCGKVEGLKLLNFSYNNIRGPLPTFRGFHVLESLDMSFNNFSGKVDSELAGLASLKSLILSFNSFNGPLPTKLGNPANLEQLGLSNNHFVGTIPAEILSYTNLTLLDLRGNNISGPIPSNIGDLSRLETLILSSNQLGGEVPSALSNIKTLVRFAANENGFFGSVPSGITRFLKNLDLSYNKLYGPIPEGLLSQSNLVSVDLSYNSLSGPLPADISSSIVRLRLGGNSLNGTISSKAFATGQKLMYIELEANHLTGQIPPEVGSCQNLALLNLAQNQLSGGLPAELGKLNNLQVLQLQGNKLSGQIPAQVSQLQKLLTLNLSYNSLDGAIPPAMFNLVTLSKIYLQQNNLSGSIPTSITVMESLIELQLGENQLSGLIPKMPLSLQIALNLSRNLFEGPIPSTLDGLNNLEILDLSNNKFDGKIPDFLTRMPALTQLELSNNSLYGVIPNFNPHVKVDLAGNNGVVNKTATSNTSRSPKGSHVVMAVLVSIAAAVFLVGLVTVLAVLISRHLYRVNDEQLQPYEDPQPPQVIQGNLLTPNGIHRSNIDFSKAMKDVAETSNVTVKTRFSTYYKTIMPSGSIYFVKKLNWSEKLFPLGSHDKFGKELEVLAKLNNSNVMTPLAYVLSTDSAYILYEFISNGSLYDALHGSLRKSLDWASRYSIAVGAAQGLSFLHGFTSGPILLLDLSSKSIMLKSLKEPLVGDIELYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVTDGTELVKWVMRNSVKQEHILDFSVSKTSQAVKTQMLAILQVALACVSSSPEARPKMKSVLRMLLNAR 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0059 947 SMART LRR_typ_2 95 118 IPR003591 -
Acco01g0059 947 SMART LRR_typ_2 478 501 IPR003591 -
Acco01g0059 947 SMART LRR_typ_2 241 265 IPR003591 -
Acco01g0059 947 SMART LRR_typ_2 524 547 IPR003591 -
Acco01g0059 947 SMART LRR_typ_2 548 570 IPR003591 -
Acco01g0059 947 SMART LRR_typ_2 406 429 IPR003591 -
Acco01g0059 947 SMART LRR_typ_2 169 193 IPR003591 -
Acco01g0059 947 SMART LRR_typ_2 430 454 IPR003591 -
Acco01g0059 947 SUPERFAMILY L domain-like 52 331 - -
Acco01g0059 947 Pfam Leucine rich repeat N-terminal domain 39 67 IPR013210 -
Acco01g0059 947 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Acco01g0059 947 Pfam Leucine rich repeat 506 561 IPR001611 GO:0005515
Acco01g0059 947 Pfam Leucine rich repeat 97 158 IPR001611 GO:0005515
Acco01g0059 947 SUPERFAMILY RNI-like 258 574 - -
Acco01g0059 947 Pfam Protein tyrosine and serine/threonine kinase 716 943 IPR001245 GO:0004672|GO:0006468
Acco01g0059 947 ProSiteProfiles Leucine-rich repeat profile. 97 118 IPR001611 GO:0005515
Acco01g0059 947 Gene3D Ribonuclease Inhibitor 446 501 IPR032675 -
Acco01g0059 947 SUPERFAMILY Protein kinase-like (PK-like) 685 943 IPR011009 -
Acco01g0059 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 188 - -
Acco01g0059 947 Gene3D Transferase(Phosphotransferase) domain 1 754 947 - -
Acco01g0059 947 PANTHER RECEPTOR-LIKE PROTEIN 55 360 944 - -
Acco01g0059 947 Gene3D Ribonuclease Inhibitor 502 592 IPR032675 -
Acco01g0059 947 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 754 947 - -
Acco01g0059 947 ProSiteProfiles Protein kinase domain profile. 674 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0059 947 Gene3D Phosphorylase Kinase; domain 1 661 753 - -
Acco01g0059 947 Gene3D Ribonuclease Inhibitor 83 445 IPR032675 -
Acco01g0059 947 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 642 753 - -
Acco01g0059 947 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 189 282 - -
Acco01g0059 947 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 330 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0059 Acco-ChrAcco01 648028 651183 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0059 148 947 Receptor kinase-like Gene Family AT2G41820 39.401 1.45e-155 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco01g0059 PK_Tyr_Ser-Thr 3.8e-22 CL0016