Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0055 ATGAGTTCGACAGAGAAGTACAGCCAAAGCCATAAGCTTCCAAGTAAGGAAGAAGACGATGAAGCCTGCCTCTATGCTATGCTGTTATCGACCTTTCAGGTGTTCCCGGCGATTCTGAACGCCGCCATAGAGCTGAAGGTGCTGGACTTGATCTCTGAGAAAGCAGGGGATTTCATGTCAGTTTCAGAGGTTGCTTCTCAAATTCCAACTCAACACTCTGAGTTACATGACAGGCTCGACCGAATGCTGCGAGTTCTGGCGTCTTTCAATGTTCTGGATTGGACCACTCGCACCAACGAACATGGCCAGGTCGAGAGGCTCTATAAACTGTCTCTTGCAGGCACTTATTTTCTGCAATCTAAAACGGAGAGCCTTGCTTCTTTCTCTAACCTCCAGTGCCACCCTGCTACTGCTAAGGTTTGGCTGAACATAAAGGAAGCAATTCTGGATGGAGGAGTAGACCTGTTCAACAAAGTACATGGCATAACAATATGGAAGTACATGGAGAAGGAGGACAAGCTGAACCAGACATTCAACAAGGCAATGGCAGGCTTATCAGCAATTCAGATGAGGAAATATCTGGAAGCATATGGTGGCTTTGAAGGAGTTTCAACCTTAGTTGATGTTGGAGGAGGCACTGGCCAAAGCCTCCAAATGATCGTCTCCAAGCACCCTCACATCAAGGGCATTAATTTTGATTTACCCCAAGTCATTCAACATGCCCCACCCCATCCAGGAATTGAGCATGTTGGAGGAGACATGTATGTTAGTGTTCCCAAGGGTGATGCTATTATGGTCAAGGCTACTTGTCACAATTGGTCAGATGAAAAATGCGTGGCACTCTTGAAAAACTGTCACAAAGCCCTTCCAGAAAATGGGAAGGTGATCATTTTGGACATGATATTGCCTGAGGAACCAGAGTCAAGTGTTGCCACTAAGTATGCGTCTATTGTAGACAACTCAATGTTTATTCAAGCTGGAGGCAGAGAAAGAACTGAGCATCAATTCCAGAAGCTCTGCAAAAACTCTGGATTCTCTAGCTTCCGTGTCGCTGCTCGCGCTCTCTCTGTTTATGGCGTCATCGAGTTTTACAAATGA 1098 0.4599 MSSTEKYSQSHKLPSKEEDDEACLYAMLLSTFQVFPAILNAAIELKVLDLISEKAGDFMSVSEVASQIPTQHSELHDRLDRMLRVLASFNVLDWTTRTNEHGQVERLYKLSLAGTYFLQSKTESLASFSNLQCHPATAKVWLNIKEAILDGGVDLFNKVHGITIWKYMEKEDKLNQTFNKAMAGLSAIQMRKYLEAYGGFEGVSTLVDVGGGTGQSLQMIVSKHPHIKGINFDLPQVIQHAPPHPGIEHVGGDMYVSVPKGDAIMVKATCHNWSDEKCVALLKNCHKALPENGKVIILDMILPEEPESSVATKYASIVDNSMFIQAGGRERTEHQFQKLCKNSGFSSFRVAARALSVYGVIEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0055 365 PANTHER O-METHYLTRANSFERASE 29 363 IPR016461 GO:0008168
Acco01g0055 365 SUPERFAMILY "Winged helix" DNA-binding domain 17 120 IPR036390 -
Acco01g0055 365 PIRSF O-mtase 3 365 IPR016461 GO:0008168
Acco01g0055 365 Gene3D Vaccinia Virus protein VP39 118 365 IPR029063 -
Acco01g0055 365 Pfam Dimerisation domain 38 87 IPR012967 GO:0046983
Acco01g0055 365 FunFam Caffeic acid 3-O-methyltransferase 3 117 - -
Acco01g0055 365 FunFam Caffeic acid O-methyltransferase 119 365 - -
Acco01g0055 365 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Acco01g0055 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 365 IPR016461 GO:0008168
Acco01g0055 365 CDD AdoMet_MTases 205 297 - -
Acco01g0055 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 363 IPR029063 -
Acco01g0055 365 Gene3D - 2 117 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0055 Acco-ChrAcco01 627695 629669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0055 1 365 Monolignol Biosynthesis Gene Families AT5G54160 46.866 4.33e-113 332