Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0052 ATGTTACTATTAGAATACGCTCAATTCCTGAATTTACCTTCTGATATTGCTTCCAAGCTTTCAAATCCACAAGCAGACTCCGTTCGCCGCCTCGATCGAGTTCTGTTTCTGCTTGCTAGTTACTCTCTTCTCACTTTCTCTTCTTCCGACAAAGTTCTCCCAGATGGTACGGTTGAGAGGCTTTATGCTCTATCTCCTACTGGTAAATACTTGATCAGTACTGTTGATGGTGATAGTGATGATGATGATGGAGTCTCTTATGCTGCTGTTTCAAAATTGTGCTGCCACCCAACTTTTTTCAAAGTCTGGCAAAACTTGAAGGAAGTGATTTATGAAGAAGAAGAGGACTTGTACAAGAAGGTTAATGGGATAACTATGTCTGAGTACATGGAAATCGATCCAGCATTCAAACTCTTGTTCCGGAAGGCAATGTCTTATGTCTGA 444 0.4099 MLLLEYAQFLNLPSDIASKLSNPQADSVRRLDRVLFLLASYSLLTFSSSDKVLPDGTVERLYALSPTGKYLISTVDGDSDDDDGVSYAAVSKLCCHPTFFKVWQNLKEVIYEEEEDLYKKVNGITMSEYMEIDPAFKLLFRKAMSYV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0052 147 Gene3D - 7 71 IPR036388 -
Acco01g0052 147 SUPERFAMILY "Winged helix" DNA-binding domain 13 72 IPR036390 -
Acco01g0052 147 Gene3D Vaccinia Virus protein VP39 79 147 IPR029063 -
Acco01g0052 147 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 147 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0052 Acco-ChrAcco01 572186 573353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0052 13 145 Monolignol Biosynthesis Gene Families AT5G54160 37.594 8.22e-17 73.9