Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0050 ATGAGCAATACAACAGAGAATGGTGAATACAGTGCTTGCCTTCATGCTTTGTTGTTATCAACTAGTCATGCTTACCCTTCATTGTTAAACGCAGCCATTGAACTCAACCTCTTTGAGATCATTGGTCAGGGAAACCCTAAGGGCATGTCACCTTCTGATATTGCTTCCAAGCTTTCAAATCCACAAGCAGACTCCGTTCGCCGCCTCGATCGAGTTCTGTTTCTGCTTGCTAGTTACTCTCTTCTCACTTTCTCTTCTTCCGACAAAGTTCTCCCAGATGGTACGGTTGAGAGGCTTTATGCTCTATCTCCTACTGGTAAATGCTTGATCAGTACTGTTGATGGTGATAGTGATGATGATGATGGAGCCTCTTATGCTGCTCTTTCAAAATTGTGCTGCCACCCAACTTTTGTCAAAGTCTGGCAAAACTTGAAGGAAGTGATTTATGAAGAAGAAGAGGACTTGTACAAGAAGGTTAATGGGATAACTATGTCTGAGTACATGGAAATCGATTTAGCATTCAAACTCTTGTTCCAGAAGGCAATGTCTGATCTCACAACCATTCACATGAGACAGATTGTTGAGACATACACAGGCTTTGAGGGAGTATCAACACTTGTTGATGTTTCTGGTGGCTACGGAAAAAGCCTAAAAATGATTATCTCTAAGTATCCTTCAACTAAGGTTATTAACTTTGATTTGCCAGAACTAGTTCAACACGCACCATCCCACCCGGGAATCACGCATGTCGGAGGAGATATTTTCGAAGGTGTCCCAGAAGGGGATGCGATAATGATTAAGAGTGCGACCCCTAATAAGTGGACAGACGAACAATGGATACAAATATTAAAGAATTGTTACGGATCACTTAAGGAAGACGGCAAGGTCATTGTTATTGGCGTGATAATGCCGGAAATCCCAGGCGAAACTGACTGCGATAAGTACGTCGCCATTCTTGATGTCATTATTCTACAATCTGGCGGGAAGCAAAGAACTGTGCAAGAATTTGAAAACCTAGCAAAGTTTGCTGGATTTTCTAGGTCTCGGGTAGCTGCCTCCGTTTTCGCGTCAGCTTTGGGAGTCATCGAGTTATATAAATAA 1101 0.4251 MSNTTENGEYSACLHALLLSTSHAYPSLLNAAIELNLFEIIGQGNPKGMSPSDIASKLSNPQADSVRRLDRVLFLLASYSLLTFSSSDKVLPDGTVERLYALSPTGKCLISTVDGDSDDDDGASYAALSKLCCHPTFVKVWQNLKEVIYEEEEDLYKKVNGITMSEYMEIDLAFKLLFQKAMSDLTTIHMRQIVETYTGFEGVSTLVDVSGGYGKSLKMIISKYPSTKVINFDLPELVQHAPSHPGITHVGGDIFEGVPEGDAIMIKSATPNKWTDEQWIQILKNCYGSLKEDGKVIVIGVIMPEIPGETDCDKYVAILDVIILQSGGKQRTVQEFENLAKFAGFSRSRVAASVFASALGVIELYK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0050 366 PANTHER O-METHYLTRANSFERASE 19 345 IPR016461 GO:0008168
Acco01g0050 366 FunFam Caffeic acid 3-O-methyltransferase 1 109 - -
Acco01g0050 366 Pfam Dimerisation domain 29 77 IPR012967 GO:0046983
Acco01g0050 366 CDD AdoMet_MTases 205 303 - -
Acco01g0050 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 366 IPR016461 GO:0008168
Acco01g0050 366 Gene3D Vaccinia Virus protein VP39 117 366 IPR029063 -
Acco01g0050 366 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Acco01g0050 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 349 IPR029063 -
Acco01g0050 366 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Acco01g0050 366 Gene3D - 1 109 IPR036388 -
Acco01g0050 366 PIRSF O-mtase 1 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0050 Acco-ChrAcco01 526780 528291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0050 12 366 Monolignol Biosynthesis Gene Families AT5G54160 44.972 2.66e-90 274