Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0046 ATGAGTGATAGAAAAAAGAAGCTGAAGCTAGAAGACATAAGCAGTAGTTCTCCGTCGTCATCCTCTCCGTCGACTTCCTCCGACTCAGACCACTCTTCCAAGAAGCGGCACCGTCATCGAAAGGAGAGGCGCAGAAGAAGCGATGGCAAGTCCAAGAGAGACAGGGAACGGAGAAGGGAAAAGGAAGAGAAAAGAAAAAGGAAGAAGATAGATAGGAAGGAGAGTAGCAGACATAGAGAAGGAAAAGAAAGGAAGAGGAGGAGAGAAGGGAAAAAGAAGAGGAGGAACTACGATTCTGATGAAGTTAGTGAAGACGGGTTTGATTCTTCCCGTAGTGGGTCCGATGAGGAAGATAGATTGAGAGTCGAACCTGAAACTGTGGTGCGCGAAATGATGAGGGAATTTCCTAATGTTGGCAACGATTTGAAACAGCTTTTGCAAATGATTGATGATGGGCAAGCTGTTGACATCAAGGGAATATCTGAAAGATTGCTCATGAATCATTTGAAGAAGCTGTTTCTTTCATTAGATCTTGAGGAAAATGGAGATAGAGTGTTCTTACTTCCCTCTAAAGTTCGTCCCACTTTGGAAGTTGTTGGCCCTCTAATTCAGTCATATATAGGTTCCAGAAAGGAGCAAATAAATAGTTCTGTATCAATGACTGAAACACATTCAGTTCCAACAGATATGAGGAATGAGAAGATGGTTGATGACCCAGAAGCTCCTTCTGCTGAACCTCAAAGAAGAATGATAGGCCCTGCTATGCCATCAGCTGAGTTACTTGCTGCTGCCGCCAAATTAACAGAGGCTCAAGCTGAGCTCAGAGAAGCAGAATTGGCAGACGATGATGAATTATTCATAGGACCTCCACCCCCTGCTATGGTTACTGAAGCAGAATCAGCTAATGAGGCAGAACGCTTTGAAGAGGTCACAAGAATCATGGAAGCTGAGGCTGACAGCCCATATGATATTCTTGGAGTCAACCATAATATGTCTACTGATAACATAAAGAAAAGGTACTGGAAGATATCACTTTTGGTTCACCCAGACAAATGCTCTCATCCTCTAGCCCACCAAGCATTTATCAAGATAAATAAAGCATTTAAAGAGTTACAAGATCCAGAGAAGAGGAAAGCAATGGATGATAAAATCAAACTGAAGCAAGAGCAGGAAGATTTAAAGGCTGAGTTCAAAGCTATGCGTGAGGCTGCACTCTGGCGAAGATCACAAGGTATATCAATGGAAGGTGATGACGTGCTTCTGGCAGAGACTGAAGTTAAAGAGGAACCAAAAAGAGATGAATGGATGACAACACTGCCTCCTGAGAGGAAACCTGGTGGTATGCCTACACAAACGACTAAGTTCAGCCGGAGCTCAAAGGGAGGGCGTGGTGATACCAGTGTTTGGACAGATACTCCATCAGACAAAGCCCAGAAAGCAAAGATGAATTATTTAGAAGCATACAATGAGGCTACTGCTCTTGCCTCAAATGATGAGTCGAAGAAAAGGGCTAATGAGGATGCTGAGTTGGTGGAGAAATACAATAAAGCGAAGAGGTCAAAATCATTGGTACAGAAGCACAAAGAAGAGCTTGCTAGCAAATCTAAGAAATCAAAGCAGAAACAAGAAGCAGAGAAAGAAGATTGGGTAGGTCAACATCCATGGAAGCCTTGGGACCGTGAAACGGATCTCACAGCTGGGAGGATGAAAGTGAGATTGGATCCAGAAAGCATGGGCGAGGGCTTATCTTCAAGGTTTTCTTCTGGAACCTTCCAGAGGAACTTCCTCTGA 1791 0.4372 MSDRKKKLKLEDISSSSPSSSSPSTSSDSDHSSKKRHRHRKERRRRSDGKSKRDRERRREKEEKRKRKKIDRKESSRHREGKERKRRREGKKKRRNYDSDEVSEDGFDSSRSGSDEEDRLRVEPETVVREMMREFPNVGNDLKQLLQMIDDGQAVDIKGISERLLMNHLKKLFLSLDLEENGDRVFLLPSKVRPTLEVVGPLIQSYIGSRKEQINSSVSMTETHSVPTDMRNEKMVDDPEAPSAEPQRRMIGPAMPSAELLAAAAKLTEAQAELREAELADDDELFIGPPPPAMVTEAESANEAERFEEVTRIMEAEADSPYDILGVNHNMSTDNIKKRYWKISLLVHPDKCSHPLAHQAFIKINKAFKELQDPEKRKAMDDKIKLKQEQEDLKAEFKAMREAALWRRSQGISMEGDDVLLAETEVKEEPKRDEWMTTLPPERKPGGMPTQTTKFSRSSKGGRGDTSVWTDTPSDKAQKAKMNYLEAYNEATALASNDESKKRANEDAELVEKYNKAKRSKSLVQKHKEELASKSKKSKQKQEAEKEDWVGQHPWKPWDRETDLTAGRMKVRLDPESMGEGLSSRFSSGTFQRNFL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0046 596 CDD DnaJ 321 373 IPR001623 -
Acco01g0046 596 MobiDBLite consensus disorder prediction 496 596 - -
Acco01g0046 596 Pfam DnaJ domain 321 381 IPR001623 -
Acco01g0046 596 Coils Coil 524 544 - -
Acco01g0046 596 MobiDBLite consensus disorder prediction 33 52 - -
Acco01g0046 596 MobiDBLite consensus disorder prediction 449 474 - -
Acco01g0046 596 Gene3D DnaJ domain 305 404 IPR036869 -
Acco01g0046 596 MobiDBLite consensus disorder prediction 1 123 - -
Acco01g0046 596 MobiDBLite consensus disorder prediction 581 596 - -
Acco01g0046 596 SUPERFAMILY Chaperone J-domain 293 378 IPR036869 -
Acco01g0046 596 Coils Coil 376 403 - -
Acco01g0046 596 Coils Coil 260 280 - -
Acco01g0046 596 MobiDBLite consensus disorder prediction 427 474 - -
Acco01g0046 596 MobiDBLite consensus disorder prediction 496 575 - -
Acco01g0046 596 ProSiteProfiles dnaJ domain profile. 320 385 IPR001623 -
Acco01g0046 596 MobiDBLite consensus disorder prediction 93 123 - -
Acco01g0046 596 MobiDBLite consensus disorder prediction 13 28 - -
Acco01g0046 596 Pfam Protein of unknown function (DUF3752) 440 587 IPR022226 -
Acco01g0046 596 MobiDBLite consensus disorder prediction 62 92 - -
Acco01g0046 596 PRINTS DnaJ domain signature 356 376 IPR001623 -
Acco01g0046 596 PRINTS DnaJ domain signature 340 355 IPR001623 -
Acco01g0046 596 PRINTS DnaJ domain signature 322 340 IPR001623 -
Acco01g0046 596 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 4 596 - -
Acco01g0046 596 SMART dnaj_3 319 376 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0046 Acco-ChrAcco01 479549 489100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0046 332 393 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.625 5.08e-06 47.0