Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0044 ATGGCAAAAAGCCCCTCTCTCTCTCTTTCTGTGCCTCAGGCAAGCTCAAGATCAGAGAACAAGATCATGACAGCAACCCAGTATTCTGAGAAATCAAGCATGGAGATGGAATCTTGTGTTCCGCCGGGGTTTAGATTTCGTCCGACAGAGGAAGAACTAGTAGGGTACTACCTCAAGAAGAAGATAAACTCGATGAAAATGGATCTAGATGTGATTGGAGAGATCGATCTGTACAAAATCGAACCGTGGGACATTCAAGATAGATGCAAGATGGGGTACGAGGAAGAGAAGGAGTGGTATTTCTTCAGTCACAAGGACAAGAAGTATCCGACAGGGACGAGGACGAACAGGGCGACGGCGGCAGGGTTCTGGAAAGCAACGGGGAGGGACAAGGCGGTGATGTCGAAGAAGAACAGAATCATAGGAATGAGGAAGACGCTCGTCTTCTACAAGGGGCGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATATCGCCTCCAAACCTCCGAACACGCCCCGCCTCAGGAAGAAGGATGGGTGGTGTGCCGAGCATTCAAGAAACCTAGTCCTACGACTCAGAACAGACCAAGTTTCGAATGTTGGAGCAGCCAAGCACTCTTTTTCAGGGACCAAATAAGCAACCCTGCTAGACCTCGATCTCTATCACTTCCCAACGAAAACCTAAATCAGATGCTTTATCCAACAAATGAAGGACCAAGTTTCCGCCATCCCTTCACTTCCAATCAACACCACCAACAGTTTCAATCATTGGAGGACAATAACAACAGCCAGCTTGTTGAGCTCATTCCACGGCTACATAGCCCCACAACAGCTAGAGCAGTGAAACAACATGGCTTCACAAATGAAGACTGTTACAATAACAGTCAAGAAGGGACTACGACGACCAATAATAATAACGTTAACGATGGTCAGGGCATTGATTGGAAGAGCTTGGACAACTTGTTCACTTCCCAGTTCGCGGATGATGATAATGCCTCTGCTGCTGCTGCTGCTTATTTTTCTCATCCAAACATGCCCTTGATGCCGCATAATAGTAGCAGTCATGACCTACAAGTATTACAACCTCAAAATCATCAAGCTAGCCATGTCCTGGGATGCTTTCCTCATTCATAA 1143 0.4689 MAKSPSLSLSVPQASSRSENKIMTATQYSEKSSMEMESCVPPGFRFRPTEEELVGYYLKKKINSMKMDLDVIGEIDLYKIEPWDIQDRCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEYRLQTSEHAPPQEEGWVVCRAFKKPSPTTQNRPSFECWSSQALFFRDQISNPARPRSLSLPNENLNQMLYPTNEGPSFRHPFTSNQHHQQFQSLEDNNNSQLVELIPRLHSPTTARAVKQHGFTNEDCYNNSQEGTTTTNNNNVNDGQGIDWKSLDNLFTSQFADDDNASAAAAAYFSHPNMPLMPHNSSSHDLQVLQPQNHQASHVLGCFPHS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0044 380 MobiDBLite consensus disorder prediction 1 20 - -
Acco01g0044 380 SUPERFAMILY NAC domain 34 190 IPR036093 GO:0003677|GO:0006355
Acco01g0044 380 Gene3D NAC domain 49 193 IPR036093 GO:0003677|GO:0006355
Acco01g0044 380 ProSiteProfiles NAC domain profile. 40 190 IPR003441 GO:0003677|GO:0006355
Acco01g0044 380 FunFam Nac domain-containing protein 86 49 193 - -
Acco01g0044 380 Pfam No apical meristem (NAM) protein 41 169 IPR003441 GO:0003677|GO:0006355
Acco01g0044 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 37 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0044 Acco-ChrAcco01 467127 471622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0044 36 380 NAC Transcription Factor Family AT1G71930 49.020 6.42e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g0044 NAM 2e-36 No_clan