Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0030 ATGCAAAGAGATAAATGGCCTGGACGTATGGCTAGAAAATGGGGTTGGTTTCCTGCAGTCAAGAAAGCTATCGTTGGTTTTGCTGATCACAAGAAAGATCAGAAAAACAATAAGTTGAAGACAACATGGCCTGCCGAACTCGCAGATTTGGAACCAGCTCAGTCATCCAAAGAAGAACTAACATTTGATGTTGCATCTCCTCCTCTCTCCATTGGCACTGATCAGGAAGAGATCAATGAACAGATCATCAAGCAAGCAGATTATTCGGTGGATGATGATGATGATGCTACTGGTGCTGTTGCAGCAGCAGACGCTGTAACTGCTGATGATGCACAGGCCCCTGATGAAGAGGTTGTTCAACCAGCGAGTCCGCCTCATTACTTGGAGAAGACAAAGGAAGAAATAGCTGCCATCAAAATTCAGACAGCATTTCGAGGGTTTTTGGCAAGAAGAGCACTTCATTCATTGAGAAGGTTGATGAGGTTGAAAACATCGATACAAGGGCATTGTGTGAAACAGCAAGAAGCAGAGTCCTTACGATGCATGAGGACTATCGCAAAGGTGCAGTCTCAGATTCGTGAGAGGAGAATTAGAATGTCTGAGGAGAACCAGTCCCTTCAGCGCCAACTGCAGGGCAGACATGACAAAGAACTCAGTAAGCCCCAAACCATTGGTGGAGAAGATTGGGATGATAGCACGAAATCTAAGAAAGAAATTGAAGCAAGGGCATTGGACAGAAAAGAAGCAGCAATGAGAAGAGAGAAAGCTCGAACGTATTCATCCATACATCAGCAAACATGGAGGAAGCAGCAGGCTTCGAAGAGTGGAAATAGGAGGACGATGAATCCAGATTGGAGTTGGAGATGGGGGGAGCGGTGGATGGGGTCACGGCCATGGGATGAGAGGCGTGGCGGTTCAGAGGGTGATGGCCGCCGTGCCCAAAAGCCAAGCCGCCCTCCCATCACTCCCAATCCCACCAAGAACCAGCGGAGGCATAGCATTTCAGGACTGTCAGTAGGAGAGGCCAGCAGCGGCTCATCAGAGAAGGCCAAGTATTGTGTTGCAGCTCCCAAATTATCTGCTCTCTCTCCAGACGCCAACACTTGTCCCTCTGCTTCAGCTTCAAAGAGGCATTCTTGTCCCCCTCACTTTCTTCCAACATAA 1164 0.482 MQRDKWPGRMARKWGWFPAVKKAIVGFADHKKDQKNNKLKTTWPAELADLEPAQSSKEELTFDVASPPLSIGTDQEEINEQIIKQADYSVDDDDDATGAVAAADAVTADDAQAPDEEVVQPASPPHYLEKTKEEIAAIKIQTAFRGFLARRALHSLRRLMRLKTSIQGHCVKQQEAESLRCMRTIAKVQSQIRERRIRMSEENQSLQRQLQGRHDKELSKPQTIGGEDWDDSTKSKKEIEARALDRKEAAMRREKARTYSSIHQQTWRKQQASKSGNRRTMNPDWSWRWGERWMGSRPWDERRGGSEGDGRRAQKPSRPPITPNPTKNQRRHSISGLSVGEASSGSSEKAKYCVAAPKLSALSPDANTCPSASASKRHSCPPHFLPT 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0030 387 MobiDBLite consensus disorder prediction 199 259 - -
Acco01g0030 387 MobiDBLite consensus disorder prediction 296 387 - -
Acco01g0030 387 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Acco01g0030 387 MobiDBLite consensus disorder prediction 296 314 - -
Acco01g0030 387 Gene3D iswi atpase 128 171 - -
Acco01g0030 387 SMART iq_5 132 154 IPR000048 GO:0005515
Acco01g0030 387 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Acco01g0030 387 Coils Coil 189 209 - -
Acco01g0030 387 PANTHER IQ-DOMAIN 5-RELATED 14 381 - -
Acco01g0030 387 MobiDBLite consensus disorder prediction 199 284 - -
Acco01g0030 387 MobiDBLite consensus disorder prediction 260 282 - -
Acco01g0030 387 MobiDBLite consensus disorder prediction 324 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0030 Acco-ChrAcco01 365662 368036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0030 10 300 IQD Protein Family AT5G03040 42.475 7.64e-64 209