Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0012 ATGTTTTCACGACTTGTACATCCTCACGAAGGGATATTTGTTCAAGAAAATATGCAGGGTGCATTGAACCACAGTCACCTTGGAGACCCATGTCTTGTCCTGACTGCTGATCCCAAACCTCGTCTTCGTTGGACTGCTGACCTTCACGAGCGATTTGTTGATGCTGTCACTCAACTTGGAGGTGCCAGTAAAGCTACACCAAAAGCAATCATGCGAACCATGAATGTCAAGGGTTTGACTCTTTATCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGAAAAGATACTGGAGAGGAATGCAAAGATGGAGTATCTGCTTCATATCTTTTAGAAAACCCTGGCGACTCTGCTCCAAAGTTGCTGGCTTCTGATGCAAATGAAGGTCACGAAGTCAAGGAAGCACTGAGAGCACAAATGGAAGTGCAAAGTAAACTGCACTTGCTAGTGGAGGCTGAGAAGCACTTGCAGATACGCCAGGATGCAGAGAGGAAATATATGGCCATGCTTGAGAGAGCCTGTAAGATGTTAGCTGATCAATTTATTGGTGCTGCAGTAATAGACAAAGACAACCAAAAATTTCAAGGCATGGGAAATAAAACACTGAAATCTTCCATGCCTGATCCCCTCGGCTTTTGCTCCTTACAGTCGAACGAGGCAACTGGAGTGCATTTTCTGGAAGCACAGCCTAGTTTCCAGCAGCAGCGGGGTGACTGTTCCACCGAAAGCTGCTTGACATCACTTGAAAGCCTCGGAGGGTTGACTCTGGAAGGATCTCCGAGTGAAGCTAAAAAGAGGATGCTGAGCTTGGACTCAATGGTGGCGCCTCTAATCTGGAGTGAAGCCAATATGAGAACTCAAGGCGTTCATCTTGCCCAGGTTAATCCTCATGGAATAACTAGGTATGGCATGTAG 927 0.4585 MFSRLVHPHEGIFVQENMQGALNHSHLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDTGEECKDGVSASYLLENPGDSAPKLLASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERKYMAMLERACKMLADQFIGAAVIDKDNQKFQGMGNKTLKSSMPDPLGFCSLQSNEATGVHFLEAQPSFQQQRGDCSTESCLTSLESLGGLTLEGSPSEAKKRMLSLDSMVAPLIWSEANMRTQGVHLAQVNPHGITRYGM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0012 308 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Acco01g0012 308 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Acco01g0012 308 FunFam Myb family transcription factor 38 96 - -
Acco01g0012 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Acco01g0012 308 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Acco01g0012 308 Gene3D - 38 96 - -
Acco01g0012 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Acco01g0012 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 259 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0012 Acco-ChrAcco01 204383 208424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0012 8 252 G2-like Transcription Factor Family AT3G24120 44.195 3.15e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco01g0012 Myb_DNA-binding 1.3e-06 CL0123