Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2331 ATGGGGAAGACAGGGAAATGGCTCAGAAACTTGTTGACCGGTAAGAAAGACAAGGAAAGGGAGAAGGAAAAATCTACATCTAACCTGAATTTTGCTTCAAATGGAACAGAAAACTCAGCCACTCCAACTTCCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTCAGAAGATCATCAGCCACTTCCACAGCCACACTAGCATCAGTTTCCAAGGAATTGAATTTTGTAGAACCAACTGTCACTGCTTCACAGACAGTGCAAGCTGACACTGATGATCAGAATGGGCAAAGGAAGCATGCCATGGCTGTGGCTGCTGCCACCGCAGCAGCAGCTGATGCTGCGGTGGCAGCTGCTGAGGCTGTAGCTGCTGTTATCCGTTTGACTTCTGCTTCCAATGCAACATCCAAAAGCATTAAAGAGGCTGCTGCCATTAAAATCCAATCAGTCTTTCGGTCTCATTTGGCAAGGAAAGCATTGTGCGCTCTAAGAGGACTGGTGAAGTTGCAGGCATTGGTAAGGGGTCATTTGGTGAGAAAACAGGCCAAGGAAACACTGAGATGCATGCAGGCTTTGGTGACGGCACAAGCTAGAGCTCGTATTCAGAGGATCCGAATGGGTTCTGAAGGAATTCCTAATCAACAACAAAGAAAAGCCACAGATGATGATTTGTTCAGGCAAATATATAATGAAATGGAGAGAGGCTTGGAAGACAATATCAAGATTGTTGAGATGGATGTGGGTGAAACAAAAAGTGATTGCAGAAGTAGAAGCAGCAGTGTATATCATCATGGGCATCAAGAACATCATGACCATAGATTTTCCACACATTATTCAACAAATGGTTCCTACTCAAAGGAAGAAAACTACAAGGTGTCACCAGCTCCATCAGCATTGACAGAGTTGAGCCCAAGAGAATGCAGCAGCCATTTTGAGGACTGTTTCAGCACAGCCCAAAGCAGCCCTCAGTTCCACTCTGCTGTGTCAAGAACAGAAAATTCAAAGCACCCTTTTTCTTTTCCAAGGCCAGCTTATGCAGAGCCTATGTGCCATGACTACCCTCTGTTTCCAAATTACATGGCTAACACTGAATCATCAAGGGCCAAAGTCAGATCGCATAGTGCACCGAAACAAAGACCTGATTCATTTGAGAGGCAACCAAGCCGCCGAAGAGCTTCAGTAGAGGGAAGAAATGTCCCAAGGCCAATTAGGATGCAAAGGTCATCTTCACATTTGAGTGCCACAGCTCAAAACTATCAATATCCTTGGTCGATCAAGCTTGACAGATCCGCAGTTTCACTCAAAGACAGCGAGTGTGGCTCTACAAGTACAGTGCTCACTAACACTAATTATTGCAGATCTCTTGTTGCATTTGACGCACGTGGAGATAGGTATTGA 1395 0.4509 MGKTGKWLRNLLTGKKDKEREKEKSTSNLNFASNGTENSATPTSTTPKEKKRWSFRRSSATSTATLASVSKELNFVEPTVTASQTVQADTDDQNGQRKHAMAVAAATAAAADAAVAAAEAVAAVIRLTSASNATSKSIKEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKETLRCMQALVTAQARARIQRIRMGSEGIPNQQQRKATDDDLFRQIYNEMERGLEDNIKIVEMDVGETKSDCRSRSSSVYHHGHQEHHDHRFSTHYSTNGSYSKEENYKVSPAPSALTELSPRECSSHFEDCFSTAQSSPQFHSAVSRTENSKHPFSFPRPAYAEPMCHDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRASVEGRNVPRPIRMQRSSSHLSATAQNYQYPWSIKLDRSAVSLKDSECGSTSTVLTNTNYCRSLVAFDARGDRY* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2331 464 MobiDBLite consensus disorder prediction 1 57 - -
Vra8g2331 464 Gene3D - 137 192 - -
Vra8g2331 464 MobiDBLite consensus disorder prediction 363 410 - -
Vra8g2331 464 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Vra8g2331 464 MobiDBLite consensus disorder prediction 262 288 - -
Vra8g2331 464 MobiDBLite consensus disorder prediction 27 48 - -
Vra8g2331 464 Pfam IQ calmodulin-binding motif 141 159 IPR000048 GO:0005515
Vra8g2331 464 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Vra8g2331 464 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 441 - -
Vra8g2331 464 MobiDBLite consensus disorder prediction 10 26 - -
Vra8g2331 464 PANTHER IQ-DOMAIN 5-RELATED 1 441 - -
Vra8g2331 464 Pfam Protein of unknown function (DUF4005) 321 397 IPR025064 -
Vra8g2331 464 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Vra8g2331 464 MobiDBLite consensus disorder prediction 369 396 - -
Vra8g2331 464 SMART iq_5 161 182 IPR000048 GO:0005515
Vra8g2331 464 SMART iq_5 138 160 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2331 Vra-Chr8 41575427 41578120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2331 1 452 IQD Protein Family AT4G14750 45.513 9.45e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2331 - - gmx:100817667 716.842