Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi707g00022 ATGGGTAACGCACACCGACATCACCCCAAACACCGTTTTCCCCTCCCTCACAACACGGTTCCCACTCCTCCACATAAATACCCCACCTCTCATCCTCCTCACAATCCACCAAACCAAAACCAAGGTGGTTCCAATTCCAACACCGACATGATCTCTTTACCTTACACCAACGCCGACACCGCTCTCCGTTCCCTCGCCGCTCAAGCCGAAGGTTACGGCCGCTTCGCAATCGGCGGACTTCATGGCTCTCTTTATCACGTCACATCACTCTTAGATGATGGACCGGGATCATTGCGTGAGGCGTGTCGCCAAAAGGAACCTTTGTGGATTGTGTTTGAGGTTTCGGGTACGATTCATCTTTCGTCTTACCTGAGTGTGTCATCTTATAAGACAGTTGATGGGAGGGGGCAAAGGGTTAAGCTGACTGGAAAGGGTTTTAAGCTGAAGCAATGTGAACATGTGATTATTTGTAATATGGAGGTGGAAGGAGGTAGAGGGCATGATGTTGATGCTATTCAGATCAAGCCTAATTCTAGACATATATGGATAGATCGTTGTACTTTGAGTGATTGTGAAGACGGGCTCATTGATATTACTCGAGGAAGCACTGAAATTACTATTTCAAGGTGTCATTTTCATAATCATGACAAAACAATACTCATTGGATCAGATCCCTCACATGTTGATGATAGATGCATAAAGGTCACAATACACCACTGTTTTTTCAACGGTACTCGACAGAGGCATCCTCGTGTTAGGTTTGCCAAAGTACATCTGTACAATAATTACAGCAGAAACTGGGGCATATATGCTGTTTGTGCAAGTGTGGAATCCCAGATATTCTCTCAACATAATATTTATGAAGCGGGCCAGAAGAAGATTGCTTTTAAGTATCTTCATGAGAAGGCAGCAGACAAGGAAGCTGAAGCAACTGGTCACATAATCTCTGAAGGGGACTTATTTTTAAATGGTGCTCAACCAGGGTTGATGACAGGGAATGTTGTGGTTAAAGTGTTTCATCCGAGTGAACACTATCGCACATGGACGGTGGAACCTCCAACAGATGATCTAAAGCAAGTTCTTCAACACTGTACTGGATGGCAATCTGTTGTGCGGCCAGCGGATCAAACCGTTTGTGCAGAATAG 1146 0.4503 MGNAHRHHPKHRFPLPHNTVPTPPHKYPTSHPPHNPPNQNQGGSNSNTDMISLPYTNADTALRSLAAQAEGYGRFAIGGLHGSLYHVTSLLDDGPGSLREACRQKEPLWIVFEVSGTIHLSSYLSVSSYKTVDGRGQRVKLTGKGFKLKQCEHVIICNMEVEGGRGHDVDAIQIKPNSRHIWIDRCTLSDCEDGLIDITRGSTEITISRCHFHNHDKTILIGSDPSHVDDRCIKVTIHHCFFNGTRQRHPRVRFAKVHLYNNYSRNWGIYAVCASVESQIFSQHNIYEAGQKKIAFKYLHEKAADKEAEATGHIISEGDLFLNGAQPGLMTGNVVVKVFHPSEHYRTWTVEPPTDDLKQVLQHCTGWQSVVRPADQTVCAE 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi707g00022 381 PRINTS Pollen allergen Amb family signature 68 85 IPR018082 -
Vivi707g00022 381 PRINTS Pollen allergen Amb family signature 270 289 IPR018082 -
Vivi707g00022 381 PRINTS Pollen allergen Amb family signature 123 139 IPR018082 -
Vivi707g00022 381 MobiDBLite consensus disorder prediction 1 52 - -
Vivi707g00022 381 Gene3D - 35 354 IPR012334 -
Vivi707g00022 381 SMART amb_all 115 293 IPR002022 -
Vivi707g00022 381 Pfam Pectate lyase 124 286 IPR002022 -
Vivi707g00022 381 MobiDBLite consensus disorder prediction 36 52 - -
Vivi707g00022 381 MobiDBLite consensus disorder prediction 16 35 - -
Vivi707g00022 381 SUPERFAMILY Pectin lyase-like 68 376 IPR011050 -
Vivi707g00022 381 PANTHER PECTATE LYASE 18-RELATED 55 326 IPR045032 GO:0030570
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi707g00022 90 378 Polysaccharide Lyase AT3G55140 75.433 1.40e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi707g00022 K01728 - gmx:100814368 600.897