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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi1g01728
ATGCATAATACTGTTTGGTGCAGTACTGTCCATCTCAAACTTCCAGATATGTATTCATCAAATAGTTCCCTCAATGGAAATAACCTAACATTTTCCTCTAATTCACCTTTTTGTTCCTTTGAAAGCAACTCAACTTCATCAAAAGATGATCACAACATTCATTCCACTTTTCCTCTCACTCCTAATTTCTCTTTCTTTCAATTTCCATATTCTGATCCATTTGAAGACAGCCAAATTTTCCTCCAACAGCAACAGCAACATGATGTTGATTTTCAGCTTCATCAACCACCTATAGAGATGAATAACAACAACAGTACTACTGCTGATGATCAGGATCAGGCTTCGAAGAATTCGATAACCGATGCCAACAACAAAGATATTGTTAATAGTCTTGTACCTGCAGAAGGTGTTTCTGGTAAAGGCAAAACTGTAGCGGTTCAGCAGATCCAAAGGAGAAGATCTAGCAAGAGGGATCGACACAGCAAGATAAAAACGGCGAAAGGACTGAGGGATCGGAGAATGAGACTGTCGCTCGAAGTCGCGAAGAGGTTCTTCGGTCTTCAAGATATGTTAGGATTTGAGAAAGCAAGCAAAACTGTGGACTGGTTACTCAACCAATCAAAAGATGGAATCAAACAACTTGCAAGGGAAAAGAATATTCACTTTCCGAGTAAGAGTTCATCTTCAACTTCTGAATGTGAAGGAGTTTCAAGCTTGGAATACAATGAAGTTGGAAACCAAGAAGAAGAAAAAGTGGTTTTGAAGAAAAGAAGAAAAGGTACTAACAAGGTTTGTAGAAAGAGTGCATTCAATTCCACTGGTAGAGAAAAAGCAAGAGAAAGAGCAAGAGAAAGAACAAAGGAAAAAATGGAAGCTAGAACTAGAACTAGAATATCACTGGTTGATGAAACAAACTCAAAGCAATGCAATGAAGGAAGAACAAAAACTAACCTCACATGGAACCCCTTTGAAACTGTGGTGGAATCTGCAGGTACACAAACTGTGAATTATCATCCTCATCCTTCATTTGATCATGTGAAGCTGATAAATAATGAAGCAGAAGATGAAAGAACCTCTCAAAAAGCAAAGGAACATCATTCACATTCACATGAAGATAATTCTTTGTTCAATATGAGCAAATGGAGTCCAACAATGATGTTCAACTCTCTCAACAACTTTCAAGAACATCAATTTGAACAATTTCATCAGTCTTTGGAAAAACCTTGGGATGGCTACAACAACCACTTCTAA
1251
0.3773
MHNTVWCSTVHLKLPDMYSSNSSLNGNNLTFSSNSPFCSFESNSTSSKDDHNIHSTFPLTPNFSFFQFPYSDPFEDSQIFLQQQQQHDVDFQLHQPPIEMNNNNSTTADDQDQASKNSITDANNKDIVNSLVPAEGVSGKGKTVAVQQIQRRRSSKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFEKASKTVDWLLNQSKDGIKQLAREKNIHFPSKSSSSTSECEGVSSLEYNEVGNQEEEKVVLKKRRKGTNKVCRKSAFNSTGREKARERARERTKEKMEARTRTRISLVDETNSKQCNEGRTKTNLTWNPFETVVESAGTQTVNYHPHPSFDHVKLINNEAEDERTSQKAKEHHSHSHEDNSLFNMSKWSPTMMFNSLNNFQEHQFEQFHQSLEKPWDGYNNHF
416
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi1g01728
416
Pfam
TCP family transcription factor
155
292
IPR017887
-
Vivi1g01728
416
ProSiteProfiles
R domain profile.
272
289
IPR017888
-
Vivi1g01728
416
MobiDBLite
consensus disorder prediction
353
373
-
-
Vivi1g01728
416
PANTHER
TRANSCRIPTION FACTOR TCP4-RELATED
111
386
IPR005333
GO:0003700
Vivi1g01728
416
Coils
Coil
275
295
-
-
Vivi1g01728
416
ProSiteProfiles
TCP domain profile.
156
214
IPR017887
-
Vivi1g01728
416
MobiDBLite
consensus disorder prediction
270
294
-
-
Vivi1g01728
416
MobiDBLite
consensus disorder prediction
353
375
-
-
Vivi1g01728
416
MobiDBLite
consensus disorder prediction
97
124
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi1g01728
Vivi-Chr1
37413338
37414979
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi1g01728
152
324
TCP Transcription Factor Family
AT1G67260
37.245
3.86e-27
109
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
TCP
Vivi1g01728
TCP
1e-41
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi1g01728
-
-
vvo:131604382
771.155
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vivi6g00676
6
20572717
20574478
Vivi1g01728
1
37413338
37414979
ECH
Vivi1g01728
1
37413338
37414979
Vivi1g01728
1
37413338
37414979
ECH
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