Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00687 ATGTATCCTCCTTTTTTCTTCTGTGTCCCCTTTCTCTCATTAAGAGCCTACCCTTCTTGTTCAAACTTGCTTGTAGAGCACCCCAAAGTGCTATCAGTGTTTGAGAACAGAGGAAGAAAGCTACACACCACTCGATCATGGGAATTCATGGGGCTAGAGCATAAAGGCATGATCCCATCTGGGTCAATCTGGAAGAAAGCCAGATTTGGTGAAGGAGTCATAATTGGAAACCTGGATACAGGTGTTTGGCCTGAATCAAATAGCTTTAGTGAAGAAGGATTGGGACCAATTCCATCAAAGTGGAGAGGAATATGTGACAATGGACTTGATCATACTTTTCAATGCAACAGGAAGCTAATCGGTGCAAGGTACTTTAACAAGGGCTACGCCTCGACAGTGGGCCCACTCAACTCTTCCTTTCAGTCCCCACGTGACAAGGAGGGCCATGGCTCCCATACTCTCTCCACAGCTGGTGGCAACGCCGTTCCTGGAGTTAGCGTCTTCGGCCAGGGCTTCGGAACAGCCAAGGGCGGCGCGCCCAAAGCCCGCGTGGCGGCGTACAAGGTCTGCTGGCCCCCCGTTGCCGATGATGAGTGCTTCGATGCTGATATCTTGGCCGCGTTTGACGAGGCCATCCACGACGGTGTGGACGTGCTGTCAGTGTCGCTCGGTGGGTCCGCCTCAAGCCTGCTCAATGACAGCGTAGCGATTGGATCATTCCATGCCGCGAGTCGAGGAATCGTGGTGGTTTGCTCCGCCGGGAATAGTGGGCCTGCCGATGCCACTGTGAGAAATCTTGCACCCTGGCATGTCACGGTTGCCGCCAGCACCATGGATAGAGAATTCCCAGCTTATGTTGTCCTCGGTAACAATATCACCTTGAAGGGTGAAAGCTTATCAGCTGCAAGATTGGCACACAAGTTGTACCCAATTATTAAAGCTACAGATGCTAAATTGGACAGTGCAAGAACAGAAGACGCGGTGCTGTGTCAGAACGGGACCTTGGATCCCAAAAAGGTGAAGGGAAAGATCGTGATATGTCTCCGAGGGATAAATGCGAGAGTGGACAAAGGAGAGCAAGCTTTACTAGCTGGTGCCGTGGGAATGGTCCTTGCTAATAACAAGGCCAGTGGCAATGAAATTATAGCTGATCCTCATGTTCTTCCTGCTTCTCATATCAATTTCACTGACGGCATTTCTGTCTTCAATTACGTCAACTCAACCAAGTTCCCAGTGGCGTATATTACACATCCAAAGACTCAATTAGGTACTAAGCCAGCACCGTTCATGGCTGCTTTTTCATCTAAAGGGCCAAATACTGTCGTGCCAGAGATCCTAAAGCCTGATGTCACCGCACCGGGAGTGTCAATTATAGCAGCCTATACTAAAGCCCAAGGACCAACCAATCAAGTGTTTGATAAGCGCCGGATTTCGTATAATTCAGTGTCAGGAACATCAATGTCGTGCCCTCATGTTTCAGGCATTGCGGCACTGTTGAGAGCATCGTATCCTTCGTGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACAGCCACAACACTTGATAATGAAGTGGAGCCTCTGCTGAATGCTACTGATGGCATGGCAACACCATTCAGTTACGGGGCAGGACATGTACAACCAAACATAGCAATGGATCCCGGGTTAGTTTATGACACAACAATTGGTGATTACCTAAACTTCTTATGTGCTTTAGGATACAACGGGACACAGATCTCAGTGTTCACAGAAGGTTCATCATATGTGTGCCGCAAGAAATTTAGTCTCCTCAACCTGAACTATCCCTCAATCACTGTTCCGAATCTCTCTGGGTCAGTGACTGTTACGAGGACATTGAAGAATGTTGGTTCTCCAAGCACGTACATTGCTCACGTTCAAAACCCGAATGGGATCTCTGTTTCTGTGAAGCCAAGCATCTTGAAGTTCACAAATGTTGGTGAAGAAAAACGCTTTAAAGTAACCTTTAAGATCATGAAAGGAAAGGCTACGAATAACTACGTGTTTGGAAAACTGATATGGTCAGATGGCAGACATTATGTCAGGAGTCCAATAGTTGTGAAGGCTCTCACGAGTAGATATTGA 2106 0.4782 MYPPFFFCVPFLSLRAYPSCSNLLVEHPKVLSVFENRGRKLHTTRSWEFMGLEHKGMIPSGSIWKKARFGEGVIIGNLDTGVWPESNSFSEEGLGPIPSKWRGICDNGLDHTFQCNRKLIGARYFNKGYASTVGPLNSSFQSPRDKEGHGSHTLSTAGGNAVPGVSVFGQGFGTAKGGAPKARVAAYKVCWPPVADDECFDADILAAFDEAIHDGVDVLSVSLGGSASSLLNDSVAIGSFHAASRGIVVVCSAGNSGPADATVRNLAPWHVTVAASTMDREFPAYVVLGNNITLKGESLSAARLAHKLYPIIKATDAKLDSARTEDAVLCQNGTLDPKKVKGKIVICLRGINARVDKGEQALLAGAVGMVLANNKASGNEIIADPHVLPASHINFTDGISVFNYVNSTKFPVAYITHPKTQLGTKPAPFMAAFSSKGPNTVVPEILKPDVTAPGVSIIAAYTKAQGPTNQVFDKRRISYNSVSGTSMSCPHVSGIAALLRASYPSWSPAAIKSAIMTTATTLDNEVEPLLNATDGMATPFSYGAGHVQPNIAMDPGLVYDTTIGDYLNFLCALGYNGTQISVFTEGSSYVCRKKFSLLNLNYPSITVPNLSGSVTVTRTLKNVGSPSTYIAHVQNPNGISVSVKPSILKFTNVGEEKRFKVTFKIMKGKATNNYVFGKLIWSDGRHYVRSPIVVKALTSRY 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00687 701 Pfam Subtilase family 70 529 IPR000209 GO:0006508|GO:0008236
Vian5g00687 701 Pfam PA domain 330 398 IPR003137 -
Vian5g00687 701 SUPERFAMILY Subtilisin-like 41 557 IPR036852 GO:0004252|GO:0006508
Vian5g00687 701 CDD PA_subtilisin_like 285 415 - -
Vian5g00687 701 Gene3D - 570 697 - -
Vian5g00687 701 SUPERFAMILY PA domain 323 413 IPR046450 -
Vian5g00687 701 FunFam Subtilisin-like protease SBT1.5 570 697 - -
Vian5g00687 701 Pfam Fibronectin type-III domain 599 694 IPR041469 -
Vian5g00687 701 Gene3D - 279 423 - -
Vian5g00687 701 FunFam Subtilisin-like protease SBT1.5 72 299 - -
Vian5g00687 701 Gene3D Peptidase S8/S53 domain 72 566 IPR036852 GO:0004252|GO:0006508
Vian5g00687 701 ProSitePatterns Serine proteases, subtilase family, serine active site. 484 494 IPR023828 -
Vian5g00687 701 MobiDBLite consensus disorder prediction 136 158 - -
Vian5g00687 701 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 694 IPR045051 -
Vian5g00687 701 CDD Peptidases_S8_3 40 520 IPR034197 -
Vian5g00687 701 ProSiteProfiles Serine proteases, subtilase domain profile. 46 553 - -
Vian5g00687 701 PRINTS Subtilisin serine protease family (S8) signature 70 89 IPR015500 -
Vian5g00687 701 PRINTS Subtilisin serine protease family (S8) signature 145 158 IPR015500 -
Vian5g00687 701 PRINTS Subtilisin serine protease family (S8) signature 483 499 IPR015500 -
Vian5g00687 701 FunFam subtilisin-like protease SBT1.5 279 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00687 Vian-Chr5 25125484 25135557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00687 24 695 Subtilisin-like Serine Gene Family AT2G04160 65.630 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00687 - - gmx:100794807 1187.56