Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04180 ATGAAGAAGGAAATCAAATCATCTGCACCTAAAATGCTTAACAGGAACTGGGTTTTAAAGCGCAAGCGGAGAAAACTTCCCGTAGCACTGGATCAGTCCGTTGGTAAAGAGAAATCCAATGGTAAAGAAGATAATTCAGTAGCATCTGAATCTTCTAGGAATGCTTCAGCTAAACGTATGCTAAAGACTGATGAAGGCACTGCTCAAACTTCTAAGAAGAAGGGGCATGACGGGTATTTCTATGAATGCGTGATTTGCGATCTTGGTGGCAACTTATTGTGCTGTGATAGCTGTCCTCGCACTTATCATTTACAGTGTCTTGACCCTCCTCTTAAGCGTATCCCTATGGGGAAGTGGCAATGTCCAAGGTGCTTTGAAGAAAATGATCAAGTAAAGCCCGTAGACCACCTGGATTCAATTTCAAAACGAGCGAGGACGAAGACTGTACCTGTAAAATCAAAAGCTGAAGTTAACCCCATCAACCTGGAAAAGGTTTCTGGAATTTTTGGAAATAAACATGTTTCAAAAAAAAGGTCAACCAAAGCAAAATCTGTTTCAACTATGGGAGGCAAATTCTTTGGAGTGAAACCATTGTCTTCTCCAGTGGAAGCAACTTGTAGCGACAAGCCAATGGACCCATCTCTTGAGAGTTGCAAGGAAGGAACTTCATCATGTGTGGATGCTGATGACAAGAACTTGAACTTGTCCCCAACAGTCTCACCTAAGGACACAATACCAGCTTCACCTGATAAGGAAGTTTTATCTCCCTCAAAAATTACTAATTTAGATGCAAATGATGACTTGCTGGAAGAGAAGCCTGATTTATCTTGTGATAAAATTCCATTTAGAAAAACACTTGTTCTTGGTATTACTGCTGGTGGAGAGGAAATGAGGAAAAGGAAGCTTAAAGTTATTAATGATAATTCTAATCAAAAGAAGCGTAGGACTGAAAAGGGGAAATTTTTTGCCGTTACTCCTACAAAGTCAAAGTCTGGAAATAATAAAGTACACAAAAAGCAAAAGTCCAAAACACACAAAATTTCCACATCTATATCAAAAGGGGACGTTGGAAAAAAGAAATCTGATGTCCAGCGGAAAGATAAGAAGTTCTCTCAGGTAATGAAAGACACATCAAATGAGCTTGATAAAGCAGGAAGCCACTTGGACGGAACTTTATTGAATGAAGACAGTGCTATCCTTGAATCTCTGCAGGTTGACCGAGTCTTGGGGTGTCGAATACAAGGTGAGGACACAAACTCCATACGGCCCTTATCCTTGAAAGCTGGGGATGACTCACCTTCCGTCGACCTGGTAATGTCAGAAAACCAGAAGCTAGATGAAGATAATTCTGCTTGTGATAATGATGTGGATGTTGAAATAGCCGAAAATCTTGATGATCCTCAAAATGTCAAAAGTTCTGATGAAGGGAAGTTGAAAACCACCGATGGAGTGGAAAGAATTCAGGTATACAGGAGATCAATACCAAAGGAAAATAAGAATGGAAATCTCATAAATTCATTGAGTAAAGCCACTGATGATTTAGGCTCTTGTGCCAGGGATGGCACAGATCAGGATGATTATGAGGTATCTGCTGAGCAGTTGGAAAAGGCAAATGCCTTGTTGGAGACAGAGGAGAATCTTAATGTTGTTTTAAGAGGTGACAGTGAGCTTCCAAAAAATTGTGAAATGCATGACTCTCTTAAAACTAAACAAAAGGAAGTGGATGTGGAGAAGGGAATGGGTAGCAGTGTTGATAATAAAGTTCAGGATGCTATTGGGGTTGAATCTGCTTGTCCAAATGGAGATAAAGTTTCCTATGAATTTTTAGTTAAGTGGGTAGGAAAGTCTTATATTCATAGTAGTTGGATTTCTGAATCCCACTTAAAAGCTATTGCAAAGAGAAAACTAGAAAATTACAAGGCAAAATATGGAACGGCGACAATAAATATTTGTGAGGAACAATGGAAGAATCCGGAGAGGTTGCTTGCTATTCGCAATTCCAAACATGGAGCATCTGAAGCTTTTGTTAAGTGGACCGGAAAACCTTATGATGAGTGCACTTGGGAAAGTTTAGATGAACCTGTGCTTCAAAATTCTTCTCATTTGATTACATGTTTTAAAATGTTTGAAACTCTCACATTGGAAAGGGATGCATCAAAGGAAAATTCAACTAAAAAAAGCAGTGACCGTCAAAATGATATAGTTAATCTTGTAGAGCAGCCTAAAGAGCTAAAAGGTGGTTCTTTGTTTCCCCATCAGCTTGAGGCTCTGAACTGGTTGCGTAAATGCTGGTATAAGTCCAAGAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACAATATCTGCTTGTGCTTTTATTTCATCTTTGTATTTTGAATTTAAAGTTTCACGTCCTTGTTTGGTCCTAGTACCTCTTGTCACAATGGGCAATTGGCTTGCTGAATTTGCACTATGGGCTCCAGATGTGAATGTTGTTCAATATCATGGCTGTGCAAAAGCAAGAGCCATAATTAGGCAGTATGAATGGCATGCAAGCGATCCAAGTGGATTGAATAAGAAAACAGAAGCCTATAAATTTAATGTGCTTTTGACTTCATATGAAATGGTTCTTGCTGATTATTCACATTTTCGGGTAGTTCCTTGGGAAGTTCTTGTTGTTGACGAGGGTCATCGACTGAAGAATTCAGAAAGTAAGCTGTTCAGCTTGCTAAATTCAATCTCTTTTCAACAGCGTGTTCTGTTGACGGGCACCCCTCTCCAGAACAACCTTGGTGAGATGTACAACTTGCTTAATTTCTTACAGCCAGCATCATTTCCTTCCCTATCTTCATTTGAGGAGAGATTTAATGATCTTACAAGTGCAGAGAAAGTTGATGAATTGAAAAAACTAGTTTCTCCTCATATGCTTCGGAGACTTAAAAAGGATGCCATGCAAAATATTCCCCCTAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGTGCAATGCTTACAAAGAATTATCAAATATTGCGGAATATTGGGAAAGGTATTCCTCAGCAATCTATGCTGAACATTGTGATGCAACTGAGGAAAGTCTGCAATCATCCATATCTCATACCAGGAACTGAGCCTGACTCTGGATCTGTTGAGTTTCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGTTGACTCTTCTGCATTCTATGCTAAAGATTTTGTATAGGGAAGGTCATAGGGTTCTTATTTTCTCACAAATGACAAAGCTTCTTGACATCCTGGAGGACTATTTGAATATCGAATTTGGGCCTAAAACATATGAGAGAGTGGATGGCTCTGTGTCTGTAGCAGATCGTCAGACAGCAATTGCACGCTTCAACCAAGACAAAAGTCGATTTGTTTTCTTACTATCCACCCGATCTTGTGGACTTGGGATAAATTTGGCCACTGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCTCATGCAGATATTCAAGCAATGAATCGAGCACACAGAATTGGGCAATCAAATAGACTTTTAGTATACCGGCTTGTGGTTCGTGCCAGCGTTGAAGAGCGCATCTTGCAGCTTGCTAAAAAGAAATTGATGCTTGATCAGCTTTTTAAAGGTAAATCTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAATGGGGAACTGAAGAACTCTTCAATAACTCTTGTGGACTGAATGGAAAAGATACAAGTGAGAATAATAATAGTAACAAAGATGAGGCAGTAGCAGATATAGAACATAAGCATCGGAAGAGGACTGGTGGTCTTGGTGATGTATACGAGGATAAGTGTACAGATAGCAGCAGCAAGATTTTGTGGGATGAAAATGCCATTTTAAAATTGCTTGATCGTTCAAACCTTCAAGATGCTTCAACTGATATCGCTGAAGGGGATTCTGAGAATGATATGCTGGGCTCAATGAAGGCCCCTGAGTGGATTGACGAACCGACTGAAGAACATGTAGAGGGTGAATCTCCTCCTCATGGAACTGATGACATGTGTGCACAAAACTCTGAGAAGAAAGAGGATAATGCAGTGATTGGTGGTGAAGAAAATGAATGGGACCGGCTATTGCGTTTGAGGTGGGAGAAATATCAGAGCGAGGAGGAAGCAGCGCTTGGTCGAGGGAAGCGACAGAGGAAAGCTGTTTCTTATAGAGAAGTATACGCTCCACACCCAATTGAAGCAGTGACTGAGAATGGCGTTGAGGAGGAAAAAGAAAAAGTACCTGAACCTGAGCGTGAATATACACCGGCAGGACGAGCCCTGAAAGCAAAATTTGCTAAACTCCGTGCTCGACAGAAGGAACGACTTGCTCAGAGGAATGCAGTTACAGAATCACATCCTGCTGAAGGACTTCCTGGTACCGAGCCACCCGTGCATCCTCCAGTCATTGCCAAGGATGGAGATCTAGGAGCTGGGCCGACCCATTCAGTTCAAGAAGGAACTTCTATCAACATAGAGGACAACAAAAATACTCAACTTTCAGAAGCTCAAAATAGCAATGCTGACTCCATATCAAGGATCGAGAATATTTCAAAACATAAAATGAGCCATCACTTTGATGTTTCTGCCAATAATCCAGGCCAATCATTACCGGAATTTTTGCCTCCAAATTACCACAATAAAGGGAGGATTAACATGACAAACTCTATGCCAAGCAACAATCTGTTGCCCGTTCTAGGACTCTGTGCTCCTAATGCTAGTCAAATAGAATCATCAGAGGGTAACACTTCAAAGTTAAATTGGAGACAAAATAGGCACGGAGCCAGACAAGATTTTCCATTCAGCCTTGCTCCTTGCACTGGGACATCCATGGATGCTGAGGCGAGAAGTAAGGAAAAGGCAGCAAATACCAAAATGTCGGATGCATCAACAGAAAACTTACAACGAAGTTTCAAAAATAGCATCCCTGATAACTTTCTCCCATTTCTTCCATTTCCACCCTCTATGCAAGGAAAGGAATCTGATGCATTTGAGAGTCAAGGTGCTAGATTCTCTGCTTTCCAGGAGAAAATGGCCCTGCCAAATCTGCCTTTCGATGAAAGATTGTTGGCGAGATTTCCACTCACAACTAAGAGCATTCCAAATTCACATCCGGACCTCTTACCTAATTTGTCTTTAGGAGGCAGACTTGAAGCTCTGAATGGATCTATGCAAGACCTCCCAACATTACCTAATTTCAAAATACCCCCTGAAGATTTATTTAGATATAATCAGCAAGACAGGGATGTGCCGCCCACCTTGGGTTTAGGACAAAGGCCAACCACACTATCATCATTCCCAGAAAACCACCGGAAAGTTCTTGAAAACATAATGATGAGAACAGGCTCTGGACCAAGTAGTTTATTAAGAAAGAAGTCAAAATCAGATGGTTGGTCGGAAGATGAACTTGATTCCCTCTGGATTGGTGTTCGTAGGCATGGAAGGGGTAATTGGGATGCCATGCTCAGAGATACCAAGTTAAAGTTTTCAAAGTATAAAACATGTGAAGAATTATCAGTGAGGTGGGAGGAGGAACAAGTAAAGGTCTTTCAGGGGCCAGCTTTTCCTGTGCAAAGATCATCTTCCAAGACAACCAAGACTACCAAATCTTCACATTTTCCAATCTCTGACGCAATGATGGAAAGGGCCTTGCAAGGCAGCAAATTTCTTTTACCGCCAAAATTTCAAAACCACCATCTGACTGACATGAAATTAGGATTAGGTGGTCCTGCATCTGGTCTTCCACATTTTAGAACAATAGATCGACCTAGTCTGCAAAATGATCACTTTGCACCTCTTCCTTCTTGGAGCCATGATATAAACAGATCAAAGTTTATTGATGATGCTTCTGCTGAAACATCTGACAGACCAGGAACTTCTTCCAATGTGCCGACAGAAAGACCATTTCTGCTCAATTCTTTTGGAACAAGCAGCTTGAGTTCTTTAGGTTTGAATTGCTCAGGCAACATTAATACACAACAACAGGAGGATGAGCGTGTAAACACCAAGCGTGGAAAGTTGCCTGTACTTCTGGATGAATCACTGAACGACATGCATGATAGTAGCACTGGATTGTTATCCAACCCCATTAAACCACACATGAATTCAAAAGGGGAAGAAATAGCTGGAAGTAGTTCTTCGAAAGACAAGCTTCCCCACTGGTTACGACAAGCTGTGGGTTCCCCTGTCAAACTTCCTGATCCTGAACTCCCTCCCACAGTATCAGCCATTGCTCATTCAGTTCGCATGCTCTATGGAGATGATAAGCCTACAATTCCTCCATTTGTGATCCCCGGACCACCCCCGTCCTTACCGAAGGACCCCAGGAGTAGTCTCAAGAAGAAAAGGAAGAGAAGATCACACAAGCTGTTTCTTCCAGATTATTCTCCAGACTTTCACAGCAGCTACCATGGTGATAATGGTGCTTCAAGCTCAACTCCTTTCCCGCCACCATTTCCTCTACTTCCTCCGTCAGGACCTCAGCAGATTGAGTCTGACCTCAACTTGCCCCCTCTTAATTTAAAAGTGGCAAACCCATCACACTCATCGAAAAAGACAAGCTCAGGACTATCTCCTTCCCCTGAAGTGCTCCAGTTGGTCGCAGCCTGTGTTGCTCCTGGCCCTCATCTTCCCTCAATCCCCAGTTCTTCAAGCTTTCTTGAGAGCAAGCTTCCATTGCCAACAAGGCCAGTTGGCAAAGCCAAATTCAAAGACTCAGAAGGTGCCTTAAAAAATAAGAAGCCTAGGAAGACTTCACCAGAAAATTGGAGTTCACCTGAAGAGCATAAAGTAGAACAAGTCCCTGATAGTGGAGATTCCAGTAAGACTCAGTCAGATCCCTCCCGGGTTGAACAGCCCCATGTAGAGGAGGTATCATCTGAGGGAACTGTCTCAGATCATGATGCGAAGAATCAGGAAACATAA 6957 0.4161 MKKEIKSSAPKMLNRNWVLKRKRRKLPVALDQSVGKEKSNGKEDNSVASESSRNASAKRMLKTDEGTAQTSKKKGHDGYFYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPMGKWQCPRCFEENDQVKPVDHLDSISKRARTKTVPVKSKAEVNPINLEKVSGIFGNKHVSKKRSTKAKSVSTMGGKFFGVKPLSSPVEATCSDKPMDPSLESCKEGTSSCVDADDKNLNLSPTVSPKDTIPASPDKEVLSPSKITNLDANDDLLEEKPDLSCDKIPFRKTLVLGITAGGEEMRKRKLKVINDNSNQKKRRTEKGKFFAVTPTKSKSGNNKVHKKQKSKTHKISTSISKGDVGKKKSDVQRKDKKFSQVMKDTSNELDKAGSHLDGTLLNEDSAILESLQVDRVLGCRIQGEDTNSIRPLSLKAGDDSPSVDLVMSENQKLDEDNSACDNDVDVEIAENLDDPQNVKSSDEGKLKTTDGVERIQVYRRSIPKENKNGNLINSLSKATDDLGSCARDGTDQDDYEVSAEQLEKANALLETEENLNVVLRGDSELPKNCEMHDSLKTKQKEVDVEKGMGSSVDNKVQDAIGVESACPNGDKVSYEFLVKWVGKSYIHSSWISESHLKAIAKRKLENYKAKYGTATINICEEQWKNPERLLAIRNSKHGASEAFVKWTGKPYDECTWESLDEPVLQNSSHLITCFKMFETLTLERDASKENSTKKSSDRQNDIVNLVEQPKELKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTISACAFISSLYFEFKVSRPCLVLVPLVTMGNWLAEFALWAPDVNVVQYHGCAKARAIIRQYEWHASDPSGLNKKTEAYKFNVLLTSYEMVLADYSHFRVVPWEVLVVDEGHRLKNSESKLFSLLNSISFQQRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEERFNDLTSAEKVDELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGIPQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILYREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFKGKSGSQKEVEDILKWGTEELFNNSCGLNGKDTSENNNSNKDEAVADIEHKHRKRTGGLGDVYEDKCTDSSSKILWDENAILKLLDRSNLQDASTDIAEGDSENDMLGSMKAPEWIDEPTEEHVEGESPPHGTDDMCAQNSEKKEDNAVIGGEENEWDRLLRLRWEKYQSEEEAALGRGKRQRKAVSYREVYAPHPIEAVTENGVEEEKEKVPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAVTESHPAEGLPGTEPPVHPPVIAKDGDLGAGPTHSVQEGTSINIEDNKNTQLSEAQNSNADSISRIENISKHKMSHHFDVSANNPGQSLPEFLPPNYHNKGRINMTNSMPSNNLLPVLGLCAPNASQIESSEGNTSKLNWRQNRHGARQDFPFSLAPCTGTSMDAEARSKEKAANTKMSDASTENLQRSFKNSIPDNFLPFLPFPPSMQGKESDAFESQGARFSAFQEKMALPNLPFDERLLARFPLTTKSIPNSHPDLLPNLSLGGRLEALNGSMQDLPTLPNFKIPPEDLFRYNQQDRDVPPTLGLGQRPTTLSSFPENHRKVLENIMMRTGSGPSSLLRKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMLRDTKLKFSKYKTCEELSVRWEEEQVKVFQGPAFPVQRSSSKTTKTTKSSHFPISDAMMERALQGSKFLLPPKFQNHHLTDMKLGLGGPASGLPHFRTIDRPSLQNDHFAPLPSWSHDINRSKFIDDASAETSDRPGTSSNVPTERPFLLNSFGTSSLSSLGLNCSGNINTQQQEDERVNTKRGKLPVLLDESLNDMHDSSTGLLSNPIKPHMNSKGEEIAGSSSSKDKLPHWLRQAVGSPVKLPDPELPPTVSAIAHSVRMLYGDDKPTIPPFVIPGPPPSLPKDPRSSLKKKRKRRSHKLFLPDYSPDFHSSYHGDNGASSSTPFPPPFPLLPPSGPQQIESDLNLPPLNLKVANPSHSSKKTSSGLSPSPEVLQLVAACVAPGPHLPSIPSSSSFLESKLPLPTRPVGKAKFKDSEGALKNKKPRKTSPENWSSPEEHKVEQVPDSGDSSKTQSDPSRVEQPHVEEVSSEGTVSDHDAKNQET 2318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04180 2318 MobiDBLite consensus disorder prediction 1 20 - -
Trre8g04180 2318 ProSiteProfiles Myb-like domain profile. 1801 1857 IPR001005 -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 1416 1436 - -
Trre8g04180 2318 Pfam Helicase conserved C-terminal domain 1069 1179 IPR001650 -
Trre8g04180 2318 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 983 1210 - -
Trre8g04180 2318 SMART chromo_7 402 644 IPR000953 -
Trre8g04180 2318 SMART chromo_7 654 714 IPR000953 -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 28 44 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 28 74 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 1241 1262 - -
Trre8g04180 2318 SMART PHD_3 82 125 IPR001965 -
Trre8g04180 2318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 126 IPR013083 -
Trre8g04180 2318 SMART DUF1087_2 1348 1409 IPR009463 -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 332 346 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 2293 2318 - -
Trre8g04180 2318 CDD SF2_C_SNF 1063 1190 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 1448 1519 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 2244 2280 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 1493 1519 - -
Trre8g04180 2318 Pfam PHD-finger 83 125 IPR019787 -
Trre8g04180 2318 Gene3D - 1774 1893 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 2104 2118 - -
Trre8g04180 2318 CDD PHD2_CHD_II 83 124 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 306 321 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 2103 2203 - -
Trre8g04180 2318 Pfam SNF2-related domain 767 1042 IPR000330 GO:0005524|GO:0140658
Trre8g04180 2318 SUPERFAMILY FYVE/PHD zinc finger 75 125 IPR011011 -
Trre8g04180 2318 ProSitePatterns Zinc finger PHD-type signature. 83 124 IPR019786 -
Trre8g04180 2318 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 761 938 IPR014001 -
Trre8g04180 2318 SMART ultradead3 745 949 IPR014001 -
Trre8g04180 2318 Coils Coil 524 547 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 57 74 - -
Trre8g04180 2318 Gene3D - 740 982 IPR038718 -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 352 369 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 2186 2203 - -
Trre8g04180 2318 CDD CD1_tandem 576 640 - -
Trre8g04180 2318 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1068 1227 IPR001650 -
Trre8g04180 2318 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 312 2271 - -
Trre8g04180 2318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 729 973 IPR027417 -
Trre8g04180 2318 Gene3D - 658 707 - -
Trre8g04180 2318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1225 IPR027417 -
Trre8g04180 2318 SUPERFAMILY Chromo domain-like 573 644 IPR016197 -
Trre8g04180 2318 ProSiteProfiles Chromo and chromo shadow domain profile. 574 642 IPR000953 -
Trre8g04180 2318 SMART helicmild6 1094 1179 IPR001650 -
Trre8g04180 2318 Gene3D - 567 643 - -
Trre8g04180 2318 Pfam CHD subfamily II, DUF1087 1368 1403 IPR009463 -
Trre8g04180 2318 ProSiteProfiles Zinc finger PHD-type profile. 80 127 IPR019787 -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 2217 2318 - -
Trre8g04180 2318 SUPERFAMILY Chromo domain-like 649 694 IPR016197 -
Trre8g04180 2318 Gene3D - 983 1210 IPR027417 -
Trre8g04180 2318 ProSiteProfiles Chromo and chromo shadow domain profile. 656 724 IPR000953 -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 1610 1643 - -
Trre8g04180 2318 MobiDBLite consensus disorder prediction 306 369 - -
Trre8g04180 2318 Pfam Chromo (CHRromatin Organisation MOdifier) domain 602 641 IPR023780 -
Trre8g04180 2318 Pfam Chromo (CHRromatin Organisation MOdifier) domain 658 706 IPR023780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04180 Trre-Chr8 46417098 46430858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04180 729 1222 RAD5 or RAD16-like Gene Family AT1G02670 26.884 9.81e-38 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Trre8g04180 SNF2_N 8.8e-56 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04180 - - gmx:100793933 3436.35