Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01270 ATGGAAGTGACAAGAATCCGCGGTTGCGCGGTTATTTATGTCATCCTCCTTTGTGCTTTGGCTCAAGGGGGCTCTGAGGGGAAGAAGGAAGATGACCTTTATAAAGATGATCATCAACTTTTATCATCTTTCCTTCATATTCATGGAAAACAGGAAGAGAAAGTGTGGAAACATTGCATGAAAGAATTGATAGAGAGGAACAATGATGTGGAAGAAAGCAATGACATGAGATCTATTCTTTCAATAGAAAACAACATTCACAAAGCAACAAAATCATTACCTCTACATATGAAAAAACAAGTTCTGAACTGCATAAGAACAAGTGCTGTTTCTCCTGCTCCTGTTTCTGAAGTAAAAACTAGTTCAAGATACTTACTTAGAAAACATTCTAAATCAACCATAGCTTTAAAAACCGATCATCGTCATCATCATCACATAACAAGTTCAATTTCCGAATCACCACATAATCATATATCACCTATATCATCAATGTCGCCGAGTCCTAGTGCTAATAGTCCATCCCCTGAGCATAAATTAGTAGCACATATTCATGTTTCAACACCAGCAAGTGCTTCTTCGTCTTCACCATCACCGACACATGATCATGAATTGGTAGCACCAATTCATATTTCAGTACTAGCAAGTGCTTCTTCACCTTCACCAACACCTGTTCCTAATACCGGATTTAAATATTTACCCTTACCTCCAGATAGTTTTGTTCAGTCTCCACCTCCCCCGAGTAAAAATATTGATCCTTCTCGTATTTTCAAACCTATAACAGATGCTCCAACTCCTTCACCTCCTGTTAACAATGAGGAAAGAAGAAAGAAAGCAATGACTTTAGCTGCTGCTGTGTCAGGAATCATAATCTTGATCGGACTGTCCCTTTGCTATCGCGAGTCCAGAAAGAGTAAAGCTAACAAAGATGACGGGCCTTTGCTCGTATTAACCTCAAATGATTTTCCTGGAGGTGCGCAGAAGGTTGTTCGATTGGGAAGTATTAATAATAAAGAAGAATCTGGTATTAACAAAGGAACGAATCCGTCTAATGTTACAAATTTGCCGATGAAGGCTGGAGATAATAACGATTCTTCACTAGTCGAAAAAACAACTATAGCAACAGTACAAGATATGGGACAACAAGTAACAGAAACTTCTTCTCGAAAACCAGCCCCTCCGCCTCCTGGTCCGCCTCCACCTCCTCCACCACGGGCACCTCCTATTGCTCCTCGTCCTCCACCACCTCCGAAAGCTGGTCATCCACCACCTGCTCCTCCGAAACCAATGGCTGGTAAAAACAAAGGTACACCTCTTGCACCAGCAAAAGATGGAAATTCTAATGAAGGTGATGCTCCAAAGCCTAAACTAAAGCCATTTTTCTGGGACAAGGTTAATGCTAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCAGGGTCATTTGTGTTCAATGAAGAAATGATGGAGTCTTTATTTGGATGCACCAACCAGAACAAAAATGAACGGAGAAAAGATTCACCTTGTGTAGATACTTCAGTTCATTATATTCAGATTATTGACCCTAAGAAAGCACAAAATTTATCAATTCTTTTACGCGCTCTGAATGTGACAACAGCAGAAGTTATTGATGCGCTTAACGAAGGTAATGAGCTTCCTTTGGAGCTTATCCAAACATTGTTGAAGATGGCACCAACACAAGAAGAGGAACTGAAACTTAGGTTATTTTCTGGAGAACTAACTCAACTAGGCCCGGCAGAGAGGTTTCTTAAAGTATTGGTTGACATTCCTTTCGCTTTCCAACGTCTTGAATGTCTCATGTTCATGCTTATTCTTCGAGAAGAGGTTTCAAGCATTAAGGATTCCTTCGCAACATTAGAGGTTGCTTGCGACAAGCTGAGAAAAAGCAGATTATTCTTAAAACTACTAGAAGCAGTACTCAAAACTGGCAACCGTATGAACGATGGTACCTACCGCGGGGGTGCTCAAGCATTTAGGCTTGACACGCTTTTAAAACTTTCAGACGTAAAAGGAACAGACGGAAAAACAACATTGTTACACTTTGTGGTTCAAGAAATTATACGTTCTGAAGGAATAAGAGCAGTAAGAACCGAAAAAGCTAGTAGAAGCATTTCAAGCGTAGGAACCGAGGATGCAGATTATGAAAACGAAGATTCAGAAGAACATTATCGTAGTCTTGGACTCCAAGTAGTGTCAAGCTTAAGCAATGAACTCGAAGATGTTAAAAAAGCAGCATTAATAGACGGTGATGCATTGAGCAGTACGGTTTTGAAACTCGGTCACTCTTTGGTTAAGACTCAGGAGTTTATGAACAATGATCTTAAGAATTTGGAAGAAGAGAGTGAATTTCAAAGTTGTTTAGAGAAGTTTATGGAGCATGCAAAAGGAGAGGTGACGTTTCTTGTTGAAGAAGAAAAACGGATAATGGCATTGGTTAAGAGTACCGCGGATTATTTTCATGGAAATGCAGGGAAAGATGAAGGGTTGCGTTTGTTTTTTATCGTGCGTGATTTCTTGATCATATTGGATAAGGTTTGTAAAGAGGTTAAGGAAGCTACATTAAAGTCGATGAAGGCTTCAGGTAAGAAAGAGGCTTTGTCAGTGTCAGTGTCAGCGCCATCTTCACCGGAAGCGAAAAATCAACAATTGTCGCCATCACAGCAATCGACATCGCCTTCTGAACTACATAGGCGACTATTTCCAGCTATTGCAGGGCGGAGACTGGATTATTCTAGTTCTGATGACGATGATGAGGAGTTTTAG 2784 0.4037 MEVTRIRGCAVIYVILLCALAQGGSEGKKEDDLYKDDHQLLSSFLHIHGKQEEKVWKHCMKELIERNNDVEESNDMRSILSIENNIHKATKSLPLHMKKQVLNCIRTSAVSPAPVSEVKTSSRYLLRKHSKSTIALKTDHRHHHHITSSISESPHNHISPISSMSPSPSANSPSPEHKLVAHIHVSTPASASSSSPSPTHDHELVAPIHISVLASASSPSPTPVPNTGFKYLPLPPDSFVQSPPPPSKNIDPSRIFKPITDAPTPSPPVNNEERRKKAMTLAAAVSGIIILIGLSLCYRESRKSKANKDDGPLLVLTSNDFPGGAQKVVRLGSINNKEESGINKGTNPSNVTNLPMKAGDNNDSSLVEKTTIATVQDMGQQVTETSSRKPAPPPPGPPPPPPPRAPPIAPRPPPPPKAGHPPPAPPKPMAGKNKGTPLAPAKDGNSNEGDAPKPKLKPFFWDKVNAKPDQSMVWHEINAGSFVFNEEMMESLFGCTNQNKNERRKDSPCVDTSVHYIQIIDPKKAQNLSILLRALNVTTAEVIDALNEGNELPLELIQTLLKMAPTQEEELKLRLFSGELTQLGPAERFLKVLVDIPFAFQRLECLMFMLILREEVSSIKDSFATLEVACDKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTEKASRSISSVGTEDADYENEDSEEHYRSLGLQVVSSLSNELEDVKKAALIDGDALSSTVLKLGHSLVKTQEFMNNDLKNLEEESEFQSCLEKFMEHAKGEVTFLVEEEKRIMALVKSTADYFHGNAGKDEGLRLFFIVRDFLIILDKVCKEVKEATLKSMKASGKKEALSVSVSAPSSPEAKNQQLSPSQQSTSPSELHRRLFPAIAGRRLDYSSSDDDDEEF 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01270 927 MobiDBLite consensus disorder prediction 133 176 - -
Trre7g01270 927 MobiDBLite consensus disorder prediction 336 363 - -
Trre7g01270 927 SUPERFAMILY Formin homology 2 domain (FH2 domain) 398 861 - -
Trre7g01270 927 MobiDBLite consensus disorder prediction 377 456 - -
Trre7g01270 927 Gene3D Formin, FH2 domain 452 881 IPR042201 -
Trre7g01270 927 Pfam Formin Homology 2 Domain 450 849 IPR015425 -
Trre7g01270 927 SMART it6_source 446 864 IPR015425 -
Trre7g01270 927 PANTHER FORMIN-RELATED 263 919 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre7g01270 927 MobiDBLite consensus disorder prediction 872 903 - -
Trre7g01270 927 MobiDBLite consensus disorder prediction 151 174 - -
Trre7g01270 927 ProSiteProfiles Formin homology-2 (FH2) domain profile. 446 875 IPR015425 -
Trre7g01270 927 MobiDBLite consensus disorder prediction 388 430 - -
Trre7g01270 927 MobiDBLite consensus disorder prediction 874 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01270 Trre-Chr7 9091661 9096342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01270 416 916 FH2 protein (formin) Gene Family AT5G54650 60.119 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01270 - - tpra:123921899 825.854