Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00737 ATGAAAGCTCATAACTCGAGCTTCAACAACATCATCATCATCATCTTCTTTTTCTCACTTTCTATATCCATCTCAGTTAACACAGCAAAACGTATCAATGAATCCGATCATCATATCACAAGAAGAATTCTCCATCAACCATTATTTCCAGCAAGTTCAGCACCACCACCATCACCAACCGTCACACCACCACCACCTTCTTCCTCCGACAATATTCCATTCTTCCATGAATATCCTGAAGGACCACCGTCGGATCAAAATCAAGCAACACCGATTACTTCAAACGCTACAGCGGCAAATCCAACTACAACGCAACCAGCAAAAGGTACTAAAAAAGTAGCAATAGTGATTTCCGTTGGAATCGTAACGTTAGGAATGTTGTCGGCGTTAGCTTTCTTTTTATACAAACACAGAGCAAAACACCCTGCGGATACACAGAAGCTAGTGTGTACTAACTCACAGAGGAATAATCACAATCATAATCAACAACAACAAGAAGATTCAAGTTCTAATGCTCCGGTTGTTGCTTCGAATTTTCTCTACATTGGAACGGTGGAACCTTCCAGAAGGTCAACAACGGTCAACGATCCGAACCAAACAGAGAAGCCTAACCGTTCGCCGTATCATAAACTGAATTCAGTTAAGCGATCCGATCGGTATAGGCCGAGTCCTGAATTACAGCCAATGCCGCCGTTGAGTAAACCTCCAGACGGAAACATTCCACCGGCGATGTCGCCGGAGTGTTCTTCCGATGAGGAGAGTAACGAAACGGCGTTTCATTCGCCGCAGAATTCTTCGTTAAGTCAGGAAGATGGATTTTACACGCCGTTTACAGTTTCACGTCAGAGTTCTCTTGTTAACGGTAGTCCGGCGAAGAGAGAGAATCATTCGACGGTGACGCCTCTTCCGTTATCGAAGAGAACTTCACCGAAATCTCGTATTTCTAATAATTCGCCGGATATTCGACACGTCATCATTCCGTCTATTAAACAGACTCCACCTCCGTCACGTCAACAACCGGAAAAACAGTTAACCACCTCCGGAGGCAGTGGACATTCAAGAAAGCCGAAATTCTCAGCACCGCCGCCACCTCCGAATTTGGCGCATCTTCAATCAACAACTAATACATTCTCAAACGTTTCTAAATCTTCACACAATCCTCCTCCTGTTCCTCCAGCTCCTCCGCCACCTCCACCGCCTCCTCCTCCGCCAATGATTCGAAAATCCGTATCTCCGACGCCGGCAGTTTCAGGTGTTTCAGGTGGTGTTGATTCTGCTGATAGTGTAACAAAAGTTTCCGACTCTGTTTCTGATGATGTTGATGAGAGTATGAATTTGAGATCTTCTTCCGAGAGGTTTGAAGTTGAAGCCAATGAAACGGAAGGTGGAAAACCGAAGCTAAAAGCTTTGCATTGGGACAAAGTTCGTGCAACTTCAGACCGTGCTACTGTGTGGGACCAAATAAAATCAAGTTCATTTCAATTAAATGAGGATATGATGGAGTCCTTGTTTGGCTGCAATAACAATGGAACAAATTCTTCTGCTACAAAACCAAAAGAACAAGGTGTTAGAAAATCAGTTCTTCCTTCTGTTGATCATGAGAACAAGGTGTTAGATCCTAAGAAGTCACAAAATATAGCTATATTGTTAAGGGCATTGAATGTGACAAGAGATGAAGTTTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAATTGAAAAACTTTGACGGGGATCTCTCGAAACTTGGATCTGCAGAAAAATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTCGAAGCTATGCTATACCGAGCTAACTTTGATTCTGAAATCAACTACCTCAAGAAGTCTTTCCAAACCCTTCAGGCAGCAAGTGAGGAATTAAGGAACAGTCGGTTATTCTTCAAGCTTCTTGAAGCTGTACTCAGGACAGGAAACAGAATGAATGTTGGCACTAATCGAGGTGATGCTAAAGCATTCAAACTAGACACACTCCTAAAACTCGTAGATATAAAGGGAACAGATGGAAAGACCACATTACTCCACTTTGTTGTCCAAGAGATCATTAGGTCTGAAGGTGCAGAAACTGAATCTGCAAACGGAAATATTCCCGAACAAATGGAGTCCAAATTTAACGAGGAGCAGTTTAAGAAGAAAGGATTGCATGTTGTGAGTGGTCTCAGTAAAGACCTTGATAATGTTAAAAAAGCAGCAGGAATGGACTCGGATGTCTTAAGTAGCTATGTTACAAAGCTTGAAACGGGGCTTGAAAAAGTGCGGTTGGTTTTGCAATACGAGAAGCCAGATATGAGAGGGAATTTCTTCAAATCCACAAAGCTCTTTATGAAATACGCAGAAGATGAAATTGTGAGGATTAAGTCTCATGAAAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGAAATGCAGCAAAGGAAGAAGCACACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTCTAAACATTTTGGATTTGGTTTGCAAAGAAGTAGGAAGGATGCATGATAGAATTGTTGGTGGTGCTTCAAGATCCTTCAGAATAGCTTCAAATGCATCATTACCTGTTCTTAACAGGTACAATGGGAAACAAGATAGAAGCTCAGATGAGGAAAGCTCATCATCCCCTTAG 2739 0.4202 MKAHNSSFNNIIIIIFFFSLSISISVNTAKRINESDHHITRRILHQPLFPASSAPPPSPTVTPPPPSSSDNIPFFHEYPEGPPSDQNQATPITSNATAANPTTTQPAKGTKKVAIVISVGIVTLGMLSALAFFLYKHRAKHPADTQKLVCTNSQRNNHNHNQQQQEDSSSNAPVVASNFLYIGTVEPSRRSTTVNDPNQTEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPPDGNIPPAMSPECSSDEESNETAFHSPQNSSLSQEDGFYTPFTVSRQSSLVNGSPAKRENHSTVTPLPLSKRTSPKSRISNNSPDIRHVIIPSIKQTPPPSRQQPEKQLTTSGGSGHSRKPKFSAPPPPPNLAHLQSTTNTFSNVSKSSHNPPPVPPAPPPPPPPPPPPMIRKSVSPTPAVSGVSGGVDSADSVTKVSDSVSDDVDESMNLRSSSERFEVEANETEGGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNNGTNSSATKPKEQGVRKSVLPSVDHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNFDGDLSKLGSAEKFLKAVLDIPFAFKRVEAMLYRANFDSEINYLKKSFQTLQAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAETESANGNIPEQMESKFNEEQFKKKGLHVVSGLSKDLDNVKKAAGMDSDVLSSYVTKLETGLEKVRLVLQYEKPDMRGNFFKSTKLFMKYAEDEIVRIKSHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNASLPVLNRYNGKQDRSSDEESSSSP 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00737 912 MobiDBLite consensus disorder prediction 248 322 - -
Trre10g00737 912 PANTHER FORMIN-RELATED 16 905 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre10g00737 912 MobiDBLite consensus disorder prediction 186 207 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 434 462 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 413 433 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 369 384 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 224 242 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 385 409 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 186 462 - -
Trre10g00737 912 Pfam Formin Homology 2 Domain 460 860 IPR015425 -
Trre10g00737 912 Gene3D Formin, FH2 domain 478 880 IPR042201 -
Trre10g00737 912 MobiDBLite consensus disorder prediction 48 109 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 83 109 - -
Trre10g00737 912 ProSiteProfiles Formin homology-2 (FH2) domain profile. 457 886 IPR015425 -
Trre10g00737 912 MobiDBLite consensus disorder prediction 331 353 - -
Trre10g00737 912 SMART it6_source 457 875 IPR015425 -
Trre10g00737 912 SUPERFAMILY Formin homology 2 domain (FH2 domain) 394 870 - -
Trre10g00737 912 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00737 Trre-Chr10 5477619 5481877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00737 458 901 FH2 protein (formin) Gene Family AT5G67470 70.470 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00737 - - gmx:100798670 1125.54