Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme264860g00001 GTGGTAAAAGATAAGGGTTTAACATTGTTAGGACTTGTTGGTATTAAGGATCCGTGTCGCCCTGGGGTGAAAACGGCGGTGGAAGCTTGCCAACATGCCGGTGTGAATGTCAAAATGATTACAGGTGACAATGTTTTCACTGCAAAAGCCATTGCATTCGAATGTGGAATTCTTCGACCAAATCAAGACACGGATGAAACTGTGGTGGAAG 211 0.4455 VVKDKGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNVFTAKAIAFECGILRPNQDTDETVVE 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme264860g00001 70 SUPERFAMILY HAD-like 1 60 IPR036412 -
Trme264860g00001 70 FunFam copper-transporting ATPase 1 isoform X2 13 58 - -
Trme264860g00001 70 PANTHER CATION TRANSPORTING ATPASE 3 70 - -
Trme264860g00001 70 Gene3D - 19 68 IPR023214 -
Trme264860g00001 70 Pfam haloacid dehalogenase-like hydrolase 8 56 - -
Trme264860g00001 70 Gene3D - 5 18 IPR023299 GO:0000166
Trme264860g00001 70 PRINTS P-type cation-transporting ATPase superfamily signature 11 22 - -
Trme264860g00001 70 PRINTS P-type cation-transporting ATPase superfamily signature 33 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme264860g00001 Trme-Chr264860 38 369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme264860g00001 1 70 Primary Pumps ATPases AT3G63380 69.014 6.29e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme264860g00001 K01537 - gmx:100793918 123.25