Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91009g00001 ATGTTCCCAATCTATTCTGAAAGATCTCAACAAGACATGTCAGCTATGGTTTCTGTCCTCACACAAGTCATTGGAGGAGGAAGTACCACCTCAAATGACCCTTTAACCCCTTCTTCTCATCAACCCAATAACATTACTACTAATCAACAATCTCAATTACCACAACAAGATCAAGGGAACACAAGAAGGAGACATTACAGAGGAGTGAGACAAAGGCCATGGGGAAAATGGGCGGCGGAGATTCGAGATCCGCAAAAGGCAGCAAGGGTTTGGCTTGGAACCTTCGAAACCGCCGAGGCGGCCGCACTTGCCTACGACGAGGCAGCTCTTAGATTCAAAGGAAGCAAAGCAAAACTCAATTTTCCCGAAAGAGTTCAAGGAACCGGAGAATTTGGTAATTATCTCACGAATTTTCACCAAAGTAATAATCGCCATCAATTTTATCATCAGAATACAACAACTCAACAAAGTTTTCAATATCCATCACAAGGAATGATGGAAAGTGGTGGTGGATTTCGTTATGATCAACAGAACATGTCTTTTGTTCCTCCATCTCATCATCAACACTATTCGTCGTCGTCTTCTTCTTCGTCTTCAGAACTATCCCACCAACAAGAACTTATGAGATCATATTCAATGCAATATGGTGGTTCTTCTTCTACTGATCATCAACATTATCAGCAACAACAATATTATCCCACTAAGAATTGGATGAATAATAATGATGATGATGACATGGATGGTAGACAATAA 753 0.4077 MFPIYSERSQQDMSAMVSVLTQVIGGGSTTSNDPLTPSSHQPNNITTNQQSQLPQQDQGNTRRRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQGTGEFGNYLTNFHQSNNRHQFYHQNTTTQQSFQYPSQGMMESGGGFRYDQQNMSFVPPSHHQHYSSSSSSSSSELSHQQELMRSYSMQYGGSSSTDHQHYQQQQYYPTKNWMNNNDDDDMDGRQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91009g00001 250 MobiDBLite consensus disorder prediction 25 71 - -
Stsc91009g00001 250 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Stsc91009g00001 250 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Stsc91009g00001 250 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Stsc91009g00001 250 Pfam AP2 domain 65 114 IPR001471 GO:0003700|GO:0006355
Stsc91009g00001 250 FunFam Ethylene-responsive transcription factor 2 64 123 - -
Stsc91009g00001 250 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Stsc91009g00001 250 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Stsc91009g00001 250 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Stsc91009g00001 250 MobiDBLite consensus disorder prediction 173 239 - -
Stsc91009g00001 250 MobiDBLite consensus disorder prediction 25 59 - -
Stsc91009g00001 250 MobiDBLite consensus disorder prediction 167 250 - -
Stsc91009g00001 250 Gene3D AP2/ERF domain 64 124 IPR036955 GO:0003700|GO:0006355
Stsc91009g00001 250 PANTHER DNA-BINDING DOMAIN 39 207 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91009g00001 Stsc-Chr91009 2060 4337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91009g00001 1 126 AP2-EREBP Transcription Factor Family AT5G61890 68.939 6.44e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc91009g00001 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91009g00001 - - adu:107463444 343.199