Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g10302 ATGATCCCCCTCTCCAACCACAACAATTATGGAGAGCGCTGTTGTGAAACCAAGGAGAAGAAAAACGTAACAACATTCTCCAACACCAAGGGACGATGGGGGAGGCCACCTGGGTCTAAGAACAAGCCTAAGCAGCCCATCCTAATCAAGGAGGACAACAATCAGTATCCCAAACCAATCATTATTGAAATTTCTGCAGGAAAAGATGTTGTTAAGGCAATCATCGAGTTCGCTTGCCGTAACATATCACGGTGCTGA 258 0.4574 MIPLSNHNNYGERCCETKEKKNVTTFSNTKGRWGRPPGSKNKPKQPILIKEDNNQYPKPIIIEISAGKDVVKAIIEFACRNISRC. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g10302 85 MobiDBLite consensus disorder prediction 25 46 - -
Seca4g10302 85 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 81 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g10302 Seca-Chr4 238483856 238484113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g10302 23 80 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 41.379 2.16e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g10302 - - tpra:123915288 71.2478