Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00877 ATGTCACTTTCCCGTGCCAAAAACTTCTTCCAGAGGTTCTGGGTAGATGAATTCCAAATGGGAAGTCTTGCCCAAAGCAACTTTTTGTCCAGTGATCTTCTACCATCTCTGGGTGCTCGAATAAACCAGGAAATTACACTAAAGAAATACATAATCTCCCCTTTCAATCCTCGGTATAGGGCTTGGGAGATGTTCCTGGTTGTTCTAGTCATATACTCAGCCTGGATTTGCCCGTTTGAGTTTGCCTTTCTACCTTATAAGCAAGATGCACTATTCATCGTAGACCACATAATCAATGGCTTCTTTGCCATTGACATTGTGCTGACATTCTTTGTTGCATACCTAGATAGCCACTCTTATCTTCTTGTTGATGATCCAAAGAGAATAGCTATTAGGTACATATCTACCTGGTTTGCTTTTGATGTCTGCTCAACGGCGCCATTGCAGTCCATCAGCCTCCTATTCACTGATCATAGTAGTGAGCTTGGCTTCAAAGTTCTTAACATGCTTCGATTATGGCGTTTGAGACGAGTCAGTTCTCTGTTTGCAAGACTTGAAAAGGACATTCGTTTCAGTTATTTCTGGACTAGGTGCACAAAGCTCATTGCTGTAACCTTGTTTGCAGTGCACTGTGCTGGATGTTTTAACTATCTAATTGCAGACAGATACCCTGATTCCAAAAGAACCTGGATTGGTGCAATGTACCCAAATTTCAAAGATGACAGTCTTTGGGACAGATATGTCACTGCAATATACTGGTCCATTGTCACACTTACTACCACAGGCTATGGAGATTTACATGCTGAGAACACGAGAGAGATGTTGTTTGATATCTTTTACATGCTGTTCAACTTGGGCTTAACATCATACATCATTGGAAACATGACTAACCTTGTAGTGCACTGGACCAGCCGCACCAGAAAGTTTAGAGATACTGTCAAAGCAGCTTCTGAATTTGCTTCAAGAAATCATTTGCCCCATCGCATACAGGATCAAATGTTGGCACACATATGCTTGCAGTATAGAACAGAAGGGTTGAAGCAGCAAGAAACATTAAATGATCTGCCAAAGGCAATTCGTTCAAGCATTGCACACCATCTTTTTTTGCCTGTTGTACAGAAGGTCTACCTCTTCCAAGGAGTCTCCCATGACTTCCTTCTCCAACTGGTTTCAGAAATGGAAGCTGAGTATTTTCCACCAAAGGAAGATGTGATACTGCAAAACGAGTCTCCTACAGACATTTACGTGCTGGTTTCAGGAGCAGTGGATCTTGTTCGCTACATTGATGGGCATGATCAAGTTCTCGGGAAGGCAATTGCAGTAGATGCATTTGGAGAAATTGGAGTTGTGTATGGTATACCACAGCCTTTCGCAGTTCGGACCACGGAGCTTTCTCAGATTTTAAGACTCAACAGAACATCCTTAATGAATGTTTTACAAGCAAATCCAGGAGATGCACAAATTATAATGGATAACCTTTTAATGAGATTACAGGGCAATGAAGGGTTTGGCTTTGAATATCCACGAACAGATCCTGGATTGGTTCTTCAGGAATTGCTTCATGGAGGTAAAACGAGAGGAAGCTCTTCTCATGAGTGTGCAAATAATTTACATGGGCATCCACTAATGCATGAAGGAGAGTACATAAATATTTCAGAAACTAGTTTGCATGAGGTGACTAATGATGTTCATTTAGTCACTAAATGTAACAAGATCCCTGTGGATGGCAAAAGAGATCTTCATGCCGCTGAGCACAAAGGGAATCTAGACATTGTTGAAATTCTGCTTGAAGGAGATGCAAATGCAAAGAACCCAAATGCCATAGGGTGGACACAAAAAGCTCGAGTACCACAGCTAAAAAACAAGAGCATTTCTGACCAGATAATGAGTTCTGAAAACGAGAAGAAATCAGAAGAATATAGAATAGAGGTTATGGAGCCAGAAATCCATAACCTTGGCAGGAATTGCTCAACCAGAAACAGTAAACAAGATGGTATTAGACCTATCAACTTCCCATCAGAAAAAGTATACAAAAACTCCAATTCAAGAAATTCTAACTGTCCAAGTGATAGAGAAACGGCAAGGTTCATCAAGAAGAGAGTAACAATCCATTTGCTAGGTGGAGGAAGAAGTACCTCGTATGGACAGCATGGAAAACTGATAATCCTACCTGATTCATTAGAAGAGCTGCTCAAAATTGCTGGTGAAAAATTTGGTGGCTTCAACCCTACAAAAGTAATTAATACAGAGAATGCCGAGATAGATGACATTAATGTCATTCGAGATGGTGATCATCTCTTTCTTCTTTGCAGCGATAGTGAAAATTTGAATTCATGA 2337 0.4069 MSLSRAKNFFQRFWVDEFQMGSLAQSNFLSSDLLPSLGARINQEITLKKYIISPFNPRYRAWEMFLVVLVIYSAWICPFEFAFLPYKQDALFIVDHIINGFFAIDIVLTFFVAYLDSHSYLLVDDPKRIAIRYISTWFAFDVCSTAPLQSISLLFTDHSSELGFKVLNMLRLWRLRRVSSLFARLEKDIRFSYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYPDSKRTWIGAMYPNFKDDSLWDRYVTAIYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRKFRDTVKAASEFASRNHLPHRIQDQMLAHICLQYRTEGLKQQETLNDLPKAIRSSIAHHLFLPVVQKVYLFQGVSHDFLLQLVSEMEAEYFPPKEDVILQNESPTDIYVLVSGAVDLVRYIDGHDQVLGKAIAVDAFGEIGVVYGIPQPFAVRTTELSQILRLNRTSLMNVLQANPGDAQIIMDNLLMRLQGNEGFGFEYPRTDPGLVLQELLHGGKTRGSSSHECANNLHGHPLMHEGEYINISETSLHEVTNDVHLVTKCNKIPVDGKRDLHAAEHKGNLDIVEILLEGDANAKNPNAIGWTQKARVPQLKNKSISDQIMSSENEKKSEEYRIEVMEPEIHNLGRNCSTRNSKQDGIRPINFPSEKVYKNSNSRNSNCPSDRETARFIKKRVTIHLLGGGRSTSYGQHGKLIILPDSLEELLKIAGEKFGGFNPTKVINTENAEIDDINVIRDGDHLFLLCSDSENLNS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00877 778 FunFam Potassium channel KAT2 365 501 - -
Rops11g00877 778 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Rops11g00877 778 Gene3D Helix hairpin bin 301 367 - -
Rops11g00877 778 PANTHER POTASSIUM CHANNEL AKT1 26 498 IPR045319 GO:0005249|GO:0006813
Rops11g00877 778 Gene3D - 59 300 - -
Rops11g00877 778 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Rops11g00877 778 Gene3D Jelly Rolls 370 502 IPR014710 -
Rops11g00877 778 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00877 778 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00877 778 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00877 778 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00877 778 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00877 778 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00877 778 FunFam Potassium channel KAT3 61 301 - -
Rops11g00877 778 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Rops11g00877 778 SMART cnmp_10 377 494 IPR000595 -
Rops11g00877 778 ProSiteProfiles KHA domain profile. 700 778 IPR021789 -
Rops11g00877 778 Pfam KHA, dimerisation domain of potassium ion channel 699 768 IPR021789 -
Rops11g00877 778 ProSiteProfiles Ankyrin repeat region circular profile. 575 601 - -
Rops11g00877 778 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops11g00877 778 CDD CAP_ED 377 490 IPR000595 -
Rops11g00877 778 ProSiteProfiles Ankyrin repeat profile. 575 607 IPR002110 GO:0005515
Rops11g00877 778 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Rops11g00877 778 MobiDBLite consensus disorder prediction 653 667 - -
Rops11g00877 778 MobiDBLite consensus disorder prediction 653 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00877 Rops-Chr11 12592310 12606567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00877 1 773 Ion Channels AT4G18290 58.344 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00877 K21867 - gmx:100811356 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00877 11 12592310 12606567 Rops11g00877 11 12592310 12606567 ECH