Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0902 ATGCATGTTGTTTTTGATGAAACTGATCATAGCCTATCTAAAACTGCTGATGAACCTGACAGTAATGAATTTAAATCTGTTTTAAATCAAAATGAATCGATTCATTTTGATACTGCTGATACACATACTGTACAAGAATCTACTGCAGCTGCAGGTTTGCCAAAAGAGTGGAAAACCCCAAGAGACTTAACCCTTGATAATGTCATTGGGAACATTGAGGCAAACAGAATAACGCCGAGTGAGATGAGGAGAAGATGCACCGTCGCTCTTGACGCCGTCAATTTGAGCAAAAACCGATACACGGACGTTTTGCCATTTGACAGTAACAGGGTTGCTCTCAAATCGAGTACAGATTATAGACCTGCAGCACAGGGGTATATCAATGCAAGCTTGGTCTCGACCTCCTCCCCTGGAAACGTGTCACAGTTTGTAGCCACACAAGGTCCACTTCCACATACTTATGAAGATTTCTGGGAGATGATTATCCAATATCACTGCCCTGCAATTATCATGCTTACAAGGTTGGTGGATAATTATAAGATGGTAAAGTGTGGAGATTATTTTCAAGCGGAGGACGGACCTAGAGAAGTTGGTAATATTTCTGTTATTGGTAAATGGGTGAACACTACCGAAACTTCATTGGTGCTGCGCCTTTTAGAGGTGAACCATAGAGAGGTAGAAGATGCTCCGATATCTGTTTTGCATATTCAGTATCCTGAATGGCCTGACCACGGAGTTCCCAAAGATACATTAGCTGTGCGTGAAATTTTGAAAAGATTATACCATTTACCACCAAACCTTGGTCCAATAGTGGTTCACTGCAGTGCAGGTATTGGTAGAACTGGAACATACTGCACAATTCACAACACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTGTAGATATTGCTAACACAGTAGCTGTGTTCAGGGCCCAGCGTATTGGAATGGTTCAGACCCAGGATCAGTACATTTTCTGCTATAAAGCTATCATAGATGAACTGGAAGACCTTGTATCTCAGCAGTAG 1032 0.4176 MHVVFDETDHSLSKTADEPDSNEFKSVLNQNESIHFDTADTHTVQESTAAAGLPKEWKTPRDLTLDNVIGNIEANRITPSEMRRRCTVALDAVNLSKNRYTDVLPFDSNRVALKSSTDYRPAAQGYINASLVSTSSPGNVSQFVATQGPLPHTYEDFWEMIIQYHCPAIIMLTRLVDNYKMVKCGDYFQAEDGPREVGNISVIGKWVNTTETSLVLRLLEVNHREVEDAPISVLHIQYPEWPDHGVPKDTLAVREILKRLYHLPPNLGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSAVDIANTVAVFRAQRIGMVQTQDQYIFCYKAIIDELEDLVSQQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0902 343 ProSitePatterns Tyrosine specific protein phosphatases active site. 272 282 IPR016130 GO:0016311|GO:0016791
Pvu7g0902 343 PRINTS Protein tyrosine phosphatase signature 125 132 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 PRINTS Protein tyrosine phosphatase signature 143 163 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 PRINTS Protein tyrosine phosphatase signature 231 248 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 PRINTS Protein tyrosine phosphatase signature 269 287 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 PRINTS Protein tyrosine phosphatase signature 302 317 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 PRINTS Protein tyrosine phosphatase signature 318 328 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 254 326 IPR000387 GO:0016311|GO:0016791
Pvu7g0902 343 MobiDBLite consensus disorder prediction 1 21 - -
Pvu7g0902 343 MobiDBLite consensus disorder prediction 1 22 - -
Pvu7g0902 343 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 62 342 - -
Pvu7g0902 343 SMART PTPc_3 64 337 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 ProSiteProfiles PTP type protein phosphatase domain profile. 94 335 IPR000242 GO:0004725|GO:0006470
Pvu7g0902 343 SMART ptp_7 232 334 IPR003595 -
Pvu7g0902 343 Gene3D Protein tyrosine phosphatase superfamily 59 337 IPR029021 -
Pvu7g0902 343 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 71 337 IPR029021 -
Pvu7g0902 343 CDD PTPc_plant_PTP1 126 329 - -
Pvu7g0902 343 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 62 342 - -
Pvu7g0902 343 Pfam Protein-tyrosine phosphatase 94 333 IPR000242 GO:0004725|GO:0006470
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0902 72 341 Protein tyrosine phosphatase (PTP) family AT1G71860 71.481 2.85e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0902 - - pvu:PHAVU_007G087900g 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0902 7 8810978 8815698 Pvu7g0902 7 8810978 8815698 ECH