Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0420 ATGGAGCCCAAGGACGAATTTGAACTCCACCATTTCACTGCACCCACAGGGACCACTTTTTCTCAGTTACTATTCGGAGATGACCATGACCATCACCATCACCATGACCACCACGATGCCACTGCATTGCCTCTTCCTCAGGACCACTCCTCTTACAATCACAACAACCTTTCCCGGTCGCCACTTTTCTCCTTTCACAAGCCACCCAAAATGCTATGCTTTGGAAACCATCAAAACCAACCCCACCTTTCGCTTCCTCCCACCACCGTCACCCCTCAGAAATCTGTCATCACTTCCAGCGATTCCTCTTCTGCTTCCTCCTCCAACTACACCAACACCGGCTTCAATTCCCTACCCAAGTCCACTAAAAAGCGGAATGGGTTGGGACAAGAGCCAGTGACCAAGGTTGGTGTTGGAGGCCAAAGACAAACTAAGAAGACCAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAACGAATCGCAGCGTTACAACAGCTTGTTTCTCCCTTCGGCAAGACAGATACAGCATCAGTGCTTCACGAGGCCATGGGCTATATAAGATTTCTTCATGACCAAGTTCAGGTCCTGTGCTCTCCTTACTTGCAAACTTTGTCTTCCTCAGACCAACACCAGCACGGGGACGGAGAAAACAATGAAGAGGAAGTGAAGAAGGAGTTGAGGAGTAGGGGTCTGTGCTTGATCCCTGTGGGATGCACCGTACACGTGGCGAGTAGCAACGGTGCTGATTTCTGGTCACCTGGTGCAATAGGGAAGAAGGTTTCACCATCATCAAGCAAGCAGTGA 828 0.5048 MEPKDEFELHHFTAPTGTTFSQLLFGDDHDHHHHHDHHDATALPLPQDHSSYNHNNLSRSPLFSFHKPPKMLCFGNHQNQPHLSLPPTTVTPQKSVITSSDSSSASSSNYTNTGFNSLPKSTKKRNGLGQEPVTKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQTLSSSDQHQHGDGENNEEEVKKELRSRGLCLIPVGCTVHVASSNGADFWSPGAIGKKVSPSSSKQ* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0420 275 MobiDBLite consensus disorder prediction 30 56 - -
Pvu7g0420 275 CDD bHLH_AtbHLH_like 159 204 IPR045239 -
Pvu7g0420 275 Gene3D - 141 234 IPR036638 GO:0046983
Pvu7g0420 275 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 67 254 - -
Pvu7g0420 275 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 67 254 - -
Pvu7g0420 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Pvu7g0420 275 MobiDBLite consensus disorder prediction 77 128 - -
Pvu7g0420 275 MobiDBLite consensus disorder prediction 74 162 - -
Pvu7g0420 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 210 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0420 Pvu-Chr7 3310574 3312871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0420 115 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 48.322 1.09e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0420 - - gmx:100809107 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0420 7 3310574 3312871 Pvu7g0420 7 3310574 3312871 ECH