Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0457 ATGCATCAAAAGAAATCCGAACTTCAGATCGGAAAAGAAAGCACCGGTGTCTCTTCCGATTTCAACCCTCTCCGCCACCACCACCACCCCAACCACCACCACCACCCTATCCCCAACCTCCAAACCCTAACCTCAACCGCGCCCTATAAAAGGCCATCCCTCTCCAAATCACCATCCCTCCACAGATTTCCAAAACCGCGCCGCGCTATTGTTCCCTCCGCCACCACCGTCACGTGGCTATCCTCCGTCGTCTCCCTCCGGCGACGCATACGTCTCTTTCTCTTCCTCTCCCTCCCATTCTTCTACTTCCTCGTCTCCCACCCTACAAACTCCTTCCTCCTCGATTTCCTCTCCGCGTTCTTCTTCTCCGCCGCGCTCTTCTTCTCGCTCAGCCTCGCGCTGCCGCGGATCCCCTCCGTCCGTTTCTTCCTCAAGCGCGAGGCCCGGCCCCGGCCCGGCCAGCCCGAGTTTCAATTCTGCGTGGTTGCGTACCCGAACGGCGACGTTTACGAGGGGGAGTTCAGGCGAGGGAAGTGTTGTGGGAGTGGAGTTTACTACTACAGCATGAGTGGGAGGTATGAGGGGGATTGGGTGGAGGGGAAGTACGATGGGTTTGGGGTGGAGACGTGGGCGAGGGGGAGTAGGTACCGGGGGCAGTACCGCCAGGGGCTTCGCCATGGGTTCGGGGTGTACCGGTTTTACACCGGCGATGTTTATGCCGGGGAGTGGGCCAGTGGGCACAGCCATGGCTGTGGGGTGCACACGTGCGAGGATGGGAGCAGAAATGGGGATACATATGCTGGTGAATATTTTGCGGATAAGGTGCATGGATATGGAGTGTATAGTTTTGCAAATGGCCATTGTTATGAAGGATCCTGGCATGAAGGCAAAAGGCAAGGTATTGGAATGTATATATTTAGAAATGGAGAAACCCAATCTGGTCACTGGCAAAATGGAGTCATTGACATCCCCAGCACACAGAGTGCTACCTTTCCTGTTTCTCCTGTTGGTGTGTATCATTCCAGAGTACTAAATGTAGTGCAGGAAGCAAGAAGAGCAGCTAAGAAGGCCTATGATGTGGCCAAGGTAGATGAAAGGGTGAATAGAGCAGTAGCAGCCGCTAACAGAGCAGCCAATGCAGCTAGAGTAGCTTCTGTCAAGGCTGTGCAAAATCAAATGCATCGTAATATTAACAACAAGAGCATCCCAATACCCATTGTGTGA 1224 0.54 MHQKKSELQIGKESTGVSSDFNPLRHHHHPNHHHHPIPNLQTLTSTAPYKRPSLSKSPSLHRFPKPRRAIVPSATTVTWLSSVVSLRRRIRLFLFLSLPFFYFLVSHPTNSFLLDFLSAFFFSAALFFSLSLALPRIPSVRFFLKREARPRPGQPEFQFCVVAYPNGDVYEGEFRRGKCCGSGVYYYSMSGRYEGDWVEGKYDGFGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGHSHGCGVHTCEDGSRNGDTYAGEYFADKVHGYGVYSFANGHCYEGSWHEGKRQGIGMYIFRNGETQSGHWQNGVIDIPSTQSATFPVSPVGVYHSRVLNVVQEARRAAKKAYDVAKVDERVNRAVAAANRAANAARVASVKAVQNQMHRNINNKSIPIPIV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0457 407 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 22 147 - -
Pvu10g0457 407 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 160 397 - -
Pvu10g0457 407 Pfam MORN repeat 216 238 IPR003409 -
Pvu10g0457 407 Pfam MORN repeat 289 310 IPR003409 -
Pvu10g0457 407 Pfam MORN repeat 170 190 IPR003409 -
Pvu10g0457 407 Pfam MORN repeat 266 287 IPR003409 -
Pvu10g0457 407 Pfam MORN repeat 193 215 IPR003409 -
Pvu10g0457 407 Pfam MORN repeat 239 261 IPR003409 -
Pvu10g0457 407 SMART morn 287 308 IPR003409 -
Pvu10g0457 407 SMART morn 237 258 IPR003409 -
Pvu10g0457 407 SMART morn 214 235 IPR003409 -
Pvu10g0457 407 SMART morn 264 285 IPR003409 -
Pvu10g0457 407 SMART morn 168 189 IPR003409 -
Pvu10g0457 407 SMART morn 191 212 IPR003409 -
Pvu10g0457 407 MobiDBLite consensus disorder prediction 1 42 - -
Pvu10g0457 407 PANTHER - 22 147 - -
Pvu10g0457 407 PANTHER - 160 397 - -
Pvu10g0457 407 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 164 260 - -
Pvu10g0457 407 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 262 321 - -
Pvu10g0457 407 Gene3D - 172 221 - -
Pvu10g0457 407 Gene3D - 272 337 - -
Pvu10g0457 407 Gene3D - 222 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0457 Pvu-Chr10 6641085 6647335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0457 163 322 Acyl Lipid Metabolism Gene Families AT1G60890 37.500 9.71e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0457 - - var:108347678 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0457 10 6641085 6647335 Pvu8g1432 8 22860647 22868459 PCT