Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02386 ATGATTTCTATAAGGCTAAGCCTTCTTTCCACACTTATCTGTTGTCTGATAATTGATCAGACATACTCCAAGAATGATCGGAAGACTTACATTGTCTACATGGGGGACCACCCTAAGGGCATGGACTCTGCATCCTTACCTTCCCTTCACATGACCATGGCGCAAGAAGTCCTCGGCAGGAAGAGTCATCCGCACACAACTAGGTCCTGGGACTTCTTAGGCGTTTCGCATGAAATCCAAAGAACAAGTTTAGAGAGTGACATAATTGTTGGAGTAATAGACACGGGAATTTGGCCAGAGTCTAAGTGCTTCACTGACAAAGGATTTGGTCCTCCACCAAGCAAATGGAAGGGATCATGCCACAACTTAACCTGCAACAACAAAATAATAGGTGCAAAATACTTCAATATCGAACGTGTCTATGCCAAAGATGATATCATATCTCCTAGAGATGCAGAAGGTCACGGGTCACACACTGCATCAACAATTGCTGGAAATTTGGTTAAGTCTGCAAGTCTACTAGGCTTTGCCTCAGGGACAGCACGTGGAGGAGTTCCATCAGCACGAATTGCTATATACAAAGCATGTTGGAAAAGAGGTTGTCTTGAGGATGACGTTCTTGCAGCATTTGATGAAGCAATTGCTGATGGAGTTGACATCATTTCTGTTTCAGCTGGACCATCCAGCTTAGAGGACATTATTCAGTATTTCCAAACTTCATATAATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTAACGTCAAATTCTGCCAATAATTTGGGTCCAGGGTTTTCCTCTATGACAACTTATCCACCTTGGATACTTTCTGTGGCTGCTAGCACTATTGGCAGAAAGTTCCTTACAAAGGTGCAATTGGGCAACGGCATGGTTTTTGAGAAATTCGGATTTGAATTTCATATTTTACTGCTCAGGCTTTGCTACGATAACTCTGTGGATAAACATTTGGTGAAAGGAAAGATCGTTCTGTGTGATGGCTTCAGATCTACTGGAGCTGTTGGGGTTTTGTCTGGGGCAGCAGGGATGCTTTTTGGAGCCACTGCTGCAAAAGATCTGCCACCGACATTTGCACTACCTGCAGTATTCCTTAGTCTAAACAACATTGAACTCATATATTCTTACATGGTTTCATCTAGAAATTCAACAGCCACAATATTTAGGAGTGACGAAGTCAATGATTCACCAGCCCCTTACATAGCTTCATTTTCATCTAGAGGTCCAAATCCAATTACCCCAAACACTCTCAAGCCCGACCTTGCTGCTCCAGGAGTTAACATTCTAGCTGCATGGTCTCCAGTTTCCCCAATTGCAGATTTTAAAGGTGACAAAAGAGCAGTACAATACAACATAATCTCTGGCACTTCAATGGCTTGTCCTCATGCATCTGCAGCAGCTGCATATATCAAATCATTTCACCCAAATTGGTCTCCTGCTATGATCAAGTCTGCATTAATGACCACAGCTACTCCAATGAGTCCTACTCTTAATCCTGAAGCTGAATTCGCATATGGCGCGGGGCAAGTTAATCCTCTTAAGGCAGTAAATCCTGGTTTAGTGTACGATATTAGTGAAGCAGATTATGTCAAGTTCTTGTGTGGAGAGGGTTATACAGACAAAATGCTTCGAATTCTCACTAAAGATCATAGTAGTTGCAAAAAACACGCTAAAAAGGAAGCTGTATATGAGCTTAATCTCCCATCAATTGCTCTCTATGTAAATGCCTCCTCATCTTTCAGTCATGTTTTCCATAGAACGGTTATGAATGTGGGATCAGCAAAGTCTAGTTATAAAGCCAAAGTGGTATCTCCATCTTTGTTGGATATTCAAGTAAAACCAAATGTTTTGTCCTTCACATCAATTGGGCAGAATAAGTCATTCTCCGTCATAATTGAAGGGAGCATTAATGCGGATATACTCTCTGCTTCTTTGGTCTGGGATGATGGAACTTTTCAAGTTAGAAGTCCCATTGTAGTGTATGGTGGAGTAGAAGTTATTACATGGTCTAAGAACACCATGGTCCCAACCAATCTTCATGTGACACATAATTGA 2073 0.4163 MISIRLSLLSTLICCLIIDQTYSKNDRKTYIVYMGDHPKGMDSASLPSLHMTMAQEVLGRKSHPHTTRSWDFLGVSHEIQRTSLESDIIVGVIDTGIWPESKCFTDKGFGPPPSKWKGSCHNLTCNNKIIGAKYFNIERVYAKDDIISPRDAEGHGSHTASTIAGNLVKSASLLGFASGTARGGVPSARIAIYKACWKRGCLEDDVLAAFDEAIADGVDIISVSAGPSSLEDIIQYFQTSYNIGSFHAMKRGILTSNSANNLGPGFSSMTTYPPWILSVAASTIGRKFLTKVQLGNGMVFEKFGFEFHILLLRLCYDNSVDKHLVKGKIVLCDGFRSTGAVGVLSGAAGMLFGATAAKDLPPTFALPAVFLSLNNIELIYSYMVSSRNSTATIFRSDEVNDSPAPYIASFSSRGPNPITPNTLKPDLAAPGVNILAAWSPVSPIADFKGDKRAVQYNIISGTSMACPHASAAAAYIKSFHPNWSPAMIKSALMTTATPMSPTLNPEAEFAYGAGQVNPLKAVNPGLVYDISEADYVKFLCGEGYTDKMLRILTKDHSSCKKHAKKEAVYELNLPSIALYVNASSSFSHVFHRTVMNVGSAKSSYKAKVVSPSLLDIQVKPNVLSFTSIGQNKSFSVIIEGSINADILSASLVWDDGTFQVRSPIVVYGGVEVITWSKNTMVPTNLHVTHN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02386 690 Pfam Subtilase family 86 514 IPR000209 GO:0006508|GO:0008236
Pumo9g02386 690 Gene3D - 539 669 - -
Pumo9g02386 690 ProSiteProfiles Serine proteases, subtilase domain profile. 69 522 - -
Pumo9g02386 690 PRINTS Subtilisin serine protease family (S8) signature 85 104 IPR015500 -
Pumo9g02386 690 PRINTS Subtilisin serine protease family (S8) signature 151 164 IPR015500 -
Pumo9g02386 690 PRINTS Subtilisin serine protease family (S8) signature 460 476 IPR015500 -
Pumo9g02386 690 CDD Peptidases_S8_3 63 497 IPR034197 -
Pumo9g02386 690 ProSitePatterns Serine proteases, subtilase family, serine active site. 461 471 IPR023828 -
Pumo9g02386 690 FunFam Subtilisin-like protease SBT1.5 87 295 - -
Pumo9g02386 690 Pfam Fibronectin type-III domain 570 666 IPR041469 -
Pumo9g02386 690 CDD PA_subtilisin_like 312 393 - -
Pumo9g02386 690 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 666 IPR045051 -
Pumo9g02386 690 Gene3D - 285 400 - -
Pumo9g02386 690 SUPERFAMILY Subtilisin-like 64 526 IPR036852 GO:0004252|GO:0006508
Pumo9g02386 690 Gene3D Peptidase S8/S53 domain 87 535 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02386 Pumo-Chr9 57715155 57720326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02386 26 667 Subtilisin-like Serine Gene Family AT5G59100 42.618 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02386 - - gmx:100787973 1029.24