Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01204 ATGGCGGCTTCTGTCGACCAGCGTCCGTACACCGGCCTCCACAACGGCGTCGTTCGGGCCTTCAAGCCAGGCCCGGACGTCCCGCGTCCCAAGAAGCTTCCGCCGCCACTCTTGGATTCCTCAAGCGACGACGAAGAAGATGACACCACCTTGAAGGACCTGATTCGTAAGGGAACCGCGGAGGTCGAATCCTCCATTTTCGACCCGCGAGACGACGGAACCTCCGACCACTGGATCCAACGGAACGCCTCCCTGGTCCGTTTAACGGGGAAGCACCCCTTCAACTGTGAGCCACCCCTCCCTCGCCTCATGCACCACGGCTTCATCACCCCCGTCCCCCTCCACTACGTCCGCAACCACGGGCCCGTCCCCCGGGCCCGCTGGGAGGATTGGACCATCGAAGTCACAGGCCTGGTCACCCGGCCCACACGCTTCACCATGGAGCAGCTCGTCCACGACTTCCCCAGCCGCGAGTTCCCCGCCACGCTCGTCTGCGCTGGGAACCGACGCAAGGAACAGAACATGGTGAAACAGAGCATCGGCTTCAACTGGGGCGCCGCCGCCATCTCCACTTCGGTGTGGCGCGGCGTACCGTTGCGTAGCCTGCTCAAGCGGTGCGGGATCTACACCCGCACGAAAGGCGCACTCCACGTGTGCTTCGAAGGCGCTGAGGACCTGCCAGGTGGCGGTGGGTCCAAGTACGGGACCAGTATCCTGAGGGAGGTTGCACTGGATCCCTCCCGCGACATCATCCTCGCCTACATGCAAAACGGCGAGCGTTTAACCCCGGATCACGGGTTCCCCGTTAGGATGATAATACCCGGTTTCATTGGAGGCCGCATGGTGAAATGGTTGAAGCGCATCATTGTCACCACCGAACAATCTGAAAATTATTACCATTACAAGGATAACAGGGTACTCCCATCTCACGTTGATGCCGAACTTGCCAATGCTGAAGCTTGGTGGTACAAGCCAGAGTATATTATCAACGAGCTTAACATAAACTCCGTGATAACCACGCCGTGCCACGACGAGATCTTGCCCATCAACTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTACGCATATTCCGGTGGTGGGAGAAAGGTGACACGTGTTGAGGTAACACTGGACGGTGGTGAAACGTGGCAAGTGTGCTCGCTGGACTGTCCGGAGAAACCCAACAAATATGGAAAGTACTGGTGTTGGTGTTTCTGGTCCTTGGAGGTTGAGATTTTGGACCTGCTCGGAGCCAAAGAGATTGCGGTGCGTGCTTGGGACGAGGCCCTCAATACCCAACCTGAAAAGCTCATTTGGAATGTTATGGGCATGATGAACAACTGCTGGTTCAGGGTGAAAACCAACGTGTGCAAGCGACACAAGGGTGAGATTGGAATAGTGTTCGAGCATCCCACTCAACCAGGCAACCAATCCGGTGGATGGATGGCCAAAGAAAAACACCTCGAGAACTCATCAGAGTCCAACCCAACCCTGAAGAAGAGTGTTTCCTCCCCATTCATGAACACCACCTCAAAAACCTATTCCATGTCAGAAGTGAGAAGGCACAACAACGCCGATTCGGCTTGGATCATAGTCCACGGCCATGTCTACGATTGCACCGACTTCCTCAAAGACCATCCCGGCGGCACAGACAGCATCCTCATCAACGCCGGCACCGACTGCACCGAGGAGTTCGAAGCCATTCACTCCGACAAAGCCAAGAAAATGCTCGAAGAATACCGAATCGGCGAGCTCACCACCACCGGCTACACCTCTGACTCTTCATCGCCAAATACCACCGTGCATGGCAATTCCGACACCACCCATTTGGCCCCCATCAAGGAAGTGATCACACAACAGCGCAGCGTGGCTCTTAACCCACGCGAGAAAATCCCATGCAAGCTCATCTCCAAAACCTCCATCTCTCACGACGTTAGGCTCTTCCGCTTTGCGTTGCCCTCCGATGACCAACTCATGGGTTTGCCAGTTGGCAAGCACATATTCCTTTGCGCCACCGTTGACAAGAAGCTATGCATGAGAGCCTACACTCCAACAAGCAGCGTTGACGAAGTGGGCTACTTCGACCTCGTCGTCAAGGTGTACTTCAAAGGAGTGCACCCCAAGTTCCCCAACGGTGGGATCATGTCTCAACACTTGGACTCGGTCCCCATTGGCTCTGTCTTGGACGTGAAAGGCCCATTGGGCCACATTGAATACACCGGCAGAGGAAACTTCCTCGTTCACGGCAAACCAAGGTTCGCCAAGAGGCTAGCCATGTTGGCTGGTGGCACCGGAATCACACCCATTTACCAAGTTGCTCAAGCGATTCTAAAGGACCCAGAGGACCACACCGAAATGCATGTGGTGTACGCGAACCGAACCGAGGATGATATATTATTAAGGGAAGAGCTTGATGAGTGGGCTAAGAAGTATGACAGGTTCAAGGTGTGGTACGTGGTGGAAAGCAAAAGAGAAGGGTGGGAATACAGTGTGGGGTTCATCACAGAAAGTATCCTGAGGGAGCATGTTCCACAAGCATCTCCTGATACCTTGGCGTTGACTTGTGGACCACCACCCATGATTCAGTTCGCAGTGCAGCCGAATTTGGAGAAGTTGGGTTACGACATCCAGAACAACTTGCTCGTGTTTTAG 2658 0.5482 MAASVDQRPYTGLHNGVVRAFKPGPDVPRPKKLPPPLLDSSSDDEEDDTTLKDLIRKGTAEVESSIFDPRDDGTSDHWIQRNASLVRLTGKHPFNCEPPLPRLMHHGFITPVPLHYVRNHGPVPRARWEDWTIEVTGLVTRPTRFTMEQLVHDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLRSLLKRCGIYTRTKGALHVCFEGAEDLPGGGGSKYGTSILREVALDPSRDIILAYMQNGERLTPDHGFPVRMIIPGFIGGRMVKWLKRIIVTTEQSENYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHDEILPINSWTTQMPYFIRGYAYSGGGRKVTRVEVTLDGGETWQVCSLDCPEKPNKYGKYWCWCFWSLEVEILDLLGAKEIAVRAWDEALNTQPEKLIWNVMGMMNNCWFRVKTNVCKRHKGEIGIVFEHPTQPGNQSGGWMAKEKHLENSSESNPTLKKSVSSPFMNTTSKTYSMSEVRRHNNADSAWIIVHGHVYDCTDFLKDHPGGTDSILINAGTDCTEEFEAIHSDKAKKMLEEYRIGELTTTGYTSDSSSPNTTVHGNSDTTHLAPIKEVITQQRSVALNPREKIPCKLISKTSISHDVRLFRFALPSDDQLMGLPVGKHIFLCATVDKKLCMRAYTPTSSVDEVGYFDLVVKVYFKGVHPKFPNGGIMSQHLDSVPIGSVLDVKGPLGHIEYTGRGNFLVHGKPRFAKRLAMLAGGTGITPIYQVAQAILKDPEDHTEMHVVYANRTEDDILLREELDEWAKKYDRFKVWYVVESKREGWEYSVGFITESILREHVPQASPDTLALTCGPPPMIQFAVQPNLEKLGYDIQNNLLVF 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01204 885 SMART Cyt_b5_2 516 588 IPR001199 -
Pumo10g01204 885 Pfam Oxidoreductase NAD-binding domain 761 867 IPR001433 GO:0016491
Pumo10g01204 885 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 544 551 IPR018506 GO:0020037
Pumo10g01204 885 FunFam Nitrate reductase 331 507 - -
Pumo10g01204 885 FunFam Nitrate reductase 509 590 - -
Pumo10g01204 885 FunFam Nitrate reductase [NADH] 737 885 - -
Pumo10g01204 885 Pfam Cytochrome b5-like Heme/Steroid binding domain 518 587 IPR001199 -
Pumo10g01204 885 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 137 172 IPR022407 GO:0043546
Pumo10g01204 885 Gene3D - 737 885 IPR039261 -
Pumo10g01204 885 FunFam NADH-cytochrome b5 reductase 620 736 - -
Pumo10g01204 885 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 69 329 IPR036374 -
Pumo10g01204 885 SUPERFAMILY E set domains 331 458 IPR014756 -
Pumo10g01204 885 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 729 880 IPR039261 -
Pumo10g01204 885 PANTHER SULFITE REDUCTASE 69 461 - -
Pumo10g01204 885 FunFam Nitrate reductase 72 321 - -
Pumo10g01204 885 Pfam Mo-co oxidoreductase dimerisation domain 327 458 IPR005066 GO:0016491|GO:0030151
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 278 291 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 360 374 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 86 100 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 262 275 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 172 184 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 108 124 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 329 341 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 161 172 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 439 452 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 426 438 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 245 261 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 374 386 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 187 202 IPR008335 GO:0016491
Pumo10g01204 885 PRINTS Eukaryotic molybdopterin domain signature 401 411 IPR008335 GO:0016491
Pumo10g01204 885 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 630 742 IPR017927 GO:0016491
Pumo10g01204 885 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 513 588 IPR001199 -
Pumo10g01204 885 Pfam Oxidoreductase molybdopterin binding domain 120 299 IPR000572 -
Pumo10g01204 885 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 682 689 IPR001709 GO:0016491
Pumo10g01204 885 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 786 795 IPR001709 GO:0016491
Pumo10g01204 885 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 829 845 IPR001709 GO:0016491
Pumo10g01204 885 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 798 809 IPR001709 GO:0016491
Pumo10g01204 885 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 853 861 IPR001709 GO:0016491
Pumo10g01204 885 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 547 557 IPR001709 GO:0016491
Pumo10g01204 885 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 760 779 IPR001709 GO:0016491
Pumo10g01204 885 PIRSF Nitr_rd_NADH 22 884 IPR012137 GO:0006809|GO:0042128|GO:0050464
Pumo10g01204 885 Gene3D - 70 321 IPR036374 -
Pumo10g01204 885 Gene3D - 508 591 IPR036400 -
Pumo10g01204 885 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 511 591 IPR036400 -
Pumo10g01204 885 PRINTS Cytochrome B5 signature 538 548 IPR001199 -
Pumo10g01204 885 PRINTS Cytochrome B5 signature 548 562 IPR001199 -
Pumo10g01204 885 PRINTS Cytochrome B5 signature 575 587 IPR001199 -
Pumo10g01204 885 PRINTS Cytochrome B5 signature 563 570 IPR001199 -
Pumo10g01204 885 SUPERFAMILY Riboflavin synthase domain-like 623 742 IPR017938 -
Pumo10g01204 885 PRINTS Cytochrome B5 reductase signature 760 779 - -
Pumo10g01204 885 PRINTS Cytochrome B5 reductase signature 661 672 - -
Pumo10g01204 885 PRINTS Cytochrome B5 reductase signature 798 809 - -
Pumo10g01204 885 PRINTS Cytochrome B5 reductase signature 682 689 - -
Pumo10g01204 885 PRINTS Cytochrome B5 reductase signature 853 861 - -
Pumo10g01204 885 PRINTS Cytochrome B5 reductase signature 727 741 - -
Pumo10g01204 885 CDD cyt_b5_reduct_like 635 885 - -
Pumo10g01204 885 Gene3D Translation factors 622 736 - -
Pumo10g01204 885 CDD eukary_NR_Moco 71 456 - -
Pumo10g01204 885 MobiDBLite consensus disorder prediction 1 50 - -
Pumo10g01204 885 Gene3D - 331 506 - -
Pumo10g01204 885 Pfam Oxidoreductase FAD-binding domain 635 741 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01204 Pumo-Chr10 15706455 15713053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01204 620 876 NADPH P450 reductases AT5G17770 39.615 2.14e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01204 K10534 - gmx:732634 1691.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01204 10 15706455 15713053 Pumo10g01204 10 15706455 15713053 ECH