Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01216 ATGTGTGGAGGAGCTATCATCTCCGACTTCATTCCAATTGGTTTGAGGAGTAGTCGTAAGGTGACTGCTGAACACCTCTGGCCCGAATTGAAGAAGCTCACTTCAGAGAGGGGGTATTCCAAGCCATTTAATCCAGACTTCATTGGTTTTGGTGATGATTTTGAAGCTGACTTCAGAAATTTCAAGGATGACTCTGAAATTGATGAGGATGATGACCATGTCCTGTCTTATTCTAAACCCTTTACTTTCTCAGCTCCATCCAAGGGAAAAGCTTCGAAGGGCTCCACCTTTGTCAAAACTACTAAATCAAATGAGCAACCTGAGAAATCTGTGAAGAGGAAGAGAAAGAATCAGTATAGGGGAATCAGGCAGCGTCCATGGGGCAAATGGGCAGCTGAGATTCGGGATCCAAGAAAGGGAGTCCGTGTCTGGCTAGGCACTTTCAATACTGCAGAAGAAGCGGCAAGAGCTTATGATACTGAAGCACGAAGAATTCGTGGCAAGAAAGCTAAGGTGAACTTTCCAGAAGATAATCCATCTAGTCCACCAAAATGTTCTACCAACAAATTCCCTAAGAAGCCACTTGTGGCTAATGGTAACTCTGTTCTCCCCAATACAAACCAAAACATTTATGTTAACAATGTGAGAAATGACTATTACAGCGACATGGGCCTGATGGAAGTGAAGCCACTGGTTGGAGAAGTTGAATATCCAAAATCTGTCCCTGGAGTCGGAAGTGATGGGATGTCATCCTTCAATTCTGATAGCGTTCTGCCCTATTTTAGTTCTGATCAGGCTAGTAACTCGTTTGGTTGTTCTGACTTCAACTGGGTTCAACAGGGTCCAAAAACTCCAGAAATATCCTCTCTGCTTTGTGCTTCTCTGGAAAATGAGATCCAGCATGCTGGTGAAGCAAACCTGGATTCAGAGTTGAAACTGACACCTGAGGGCTTCAAACCTGCAAAAGAAAATCCTGAGAAGACGCTTTCTGATGAGCTCTTGGGCATGGAGTCCTTTGAGATGCCTTCTCTTGAATTCAACTGGGACGAGGCTTCACTAGATACCCTCTTGAACGGAGGCACTCAAGATGGAAGACTTGTGGACTTTTGGAGCTTCGATCAGAATGTTTCTTCCCCGGGAGGAGATTTCTGA 1152 0.4462 MCGGAIISDFIPIGLRSSRKVTAEHLWPELKKLTSERGYSKPFNPDFIGFGDDFEADFRNFKDDSEIDEDDDHVLSYSKPFTFSAPSKGKASKGSTFVKTTKSNEQPEKSVKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDTEARRIRGKKAKVNFPEDNPSSPPKCSTNKFPKKPLVANGNSVLPNTNQNIYVNNVRNDYYSDMGLMEVKPLVGEVEYPKSVPGVGSDGMSSFNSDSVLPYFSSDQASNSFGCSDFNWVQQGPKTPEISSLLCASLENEIQHAGEANLDSELKLTPEGFKPAKENPEKTLSDELLGMESFEMPSLEFNWDEASLDTLLNGGTQDGRLVDFWSFDQNVSSPGGDF* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01216 383 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Pte7g01216 383 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Pte7g01216 383 PANTHER DNA-BINDING DOMAIN 88 230 IPR044808 GO:0003700|GO:0009873
Pte7g01216 383 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Pte7g01216 383 CDD AP2 118 177 IPR001471 GO:0003700|GO:0006355
Pte7g01216 383 MobiDBLite consensus disorder prediction 86 104 - -
Pte7g01216 383 FunFam Ethylene-responsive transcription factor 2 117 176 - -
Pte7g01216 383 MobiDBLite consensus disorder prediction 86 119 - -
Pte7g01216 383 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Pte7g01216 383 SUPERFAMILY DNA-binding domain 118 176 IPR016177 GO:0003677
Pte7g01216 383 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Pte7g01216 383 Gene3D AP2/ERF domain 117 176 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01216 Pte-Chr7 36553260 36555813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g01216 1 384 AP2-EREBP Transcription Factor Family AT3G14230 46.305 2.66e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g01216 AP2 6.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01216 K09286 - mof:131167124 363.614